Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 9e-16 >seq1 Length=925270 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 16250 TGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCT 16309 |||| ||| ||||| | | || ||||||||||| ||||| || || ||||| || || Sbjct 578341 TGCATTCCCTCGTCGCGGATAATCAACTCGTTTGAGAATGTCAGTCCGGGCATGAGGCCG 578400 Query 16310 CGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCG 16369 ||||| || | ||| ||||| ||||| || || || || || || || || || || ||| Sbjct 578401 CGTTTCTTGAGCCAGAATATGGCGGCGAACGAGCCGGAGAAAAAGATGCCCTCCACGGCG 578460 Query 16370 GCAAATGCAACCAATCGCTCACCG 16393 || || || |||| ||||||| || Sbjct 578461 GCGAAGGCCACCAGTCGCTCAGCG 578484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462499408110800