Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1362 100 2e-16 >seq1362 Length=45920 Score = 100 bits (110), Expect = 2e-16 Identities = 237/349 (68%), Gaps = 12/349 (3%) Strand=Plus/Plus Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGGCCGCCTGTTAAT---TAG 21220 || || |||||||||| | | |||||| ||||| |||||| | | ||||| | | Sbjct 43253 GCAGGATTCCACGCGCTGAGGATGATGCGGCGATCAGTGGGGTCTTCC-TTAATCTTTCG 43311 Query 21221 -ATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCC 21279 || ||| || || |||||||| || ||||| || ||| | |||||| || Sbjct 43312 TATGCACTCCG---CG-AGCTGGTCGACACCCTGGCCAGTGTAATCCGCGTCGCAGTCCG 43367 Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGC 21339 |||||| ||| |||||||| ||||||||||| || |||||||||||||| || || || | Sbjct 43368 TGTACTTCGCGCCAAAATGCCTCCACTGGAAGCCATACACCGGCCCCAGGTCCCCTTCCC 43427 Query 21340 GGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTT 21399 | || || | ||| || | ||| ||| | | ||||| | | ||||| || | Sbjct 43428 TCCTGTGGCCAAGCCCCCGCTTCTCCAGAAACTCCTTGCTCCCGTTCCCATCCCAGATCT 43487 Query 21400 TTACGCCGCGGCG-CGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAAC 21458 | | ||| | || ||||| | || || ||||| || || |||||||| | | Sbjct 43488 TGATGCC-CTTCGCCGACAAAAGCTTCGAATCCGTGGAACCGTGAATGAACCACAGGAGC 43546 Query 21459 TCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAA 21507 ||||||| | || | |||||| | ||| ||||| | ||||||| Sbjct 43547 TCCTCCAGAATACCGCGCCAAAATGTGCGTTTAGTGGTGAGAAGAGGAA 43595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427764644953440