Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 2e-15 >seq1 Length=925270 Score = 96.9 bits (106), Expect = 2e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 ||||||| || || || || ||| || | || || || || || || ||||||||||||| Sbjct 578470 TGGCCTTCGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGTTCGCCGCCATATTCTGGC 578411 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||||| |||||||| || || | || || ||||||||||||| ||| |||| Sbjct 578410 TCAAGAAACGCGGCCTCATGCCCGGACTGACATTCTCAAACGAGTTGATTATCCGCGACG 578351 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCT 22898 | || | ||| ||||| || || |||| Sbjct 578350 AGGGAATGCACACGGACTTCGCATGCTTGCT 578320 Score = 96.9 bits (106), Expect = 2e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | || || || || || || || || | || ||||| || |||||| | || Sbjct 580587 CGTCTCGTCGCTTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTTGCGTCGATC 580646 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| ||| |||||||| || | |||| || |||||| |||| ||| Sbjct 580647 TTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCACGTTCTCTAACGAGCTGATCAGC 580706 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 |||||||| || | ||| ||||| ||||| |||| || Sbjct 580707 CGTGACGAGGGCATGCACACCGACTTCGCTTGCTTGCTCTT 580747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356224144001734