Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1836 82.4 8e-11 >seq1836 Length=575610 Score = 82.4 bits (90), Expect = 8e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 143040 ||||| || || || || || |||||||| || || |||| |||||| | || Sbjct 191691 ATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCAACTG 191750 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 || || ||| | ||||| || |||||||||||||| ||||| || ||||| || || Sbjct 191751 CTTGCCCGCAAAAATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 191810 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 || | | || | |||||| | | || ||||| | || | ||||||||| || Sbjct 191811 CGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCCGT 191870 Query 143161 CAATGTTTTTACGAATATTTGCATA 143185 | || || ||||| ||||||||| Sbjct 191871 GAGAGTCTTGACGAAGATTTGCATA 191895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507000596532960