Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1494 102 2e-16 >seq1494 Length=22227 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || ||||| || || | || || ||||| |||| | |||| ||||| | ||||| Sbjct 18142 GGTTACTCAAACGGTATTGTGCCTATGCTGCGTGCATATGACGCGACTGCCCGATACGTT 18201 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||| ||||| ||||| || || || ||||| || |||||||| |||| | Sbjct 18202 GACCAAGGTGGTAACAAGCGACCCGGCGCTTTCGCTATCTACCTCGAGCCCTGGCATGAC 18261 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 ||| | || ||||| || || ||||| || || || ||||||||| | ||||| || Sbjct 18262 GATGTCTTCGAGTTCCTCGATCTCCGAAAGAATCATGGCAAAGAGGAAGTCCGTGCCCGC 18321 Query 363934 GATCTGTTCTATGCACTTTGG 363954 || || ||||||||||| ||| Sbjct 18322 GACCTCTTCTATGCACTCTGG 18342 Score = 96.9 bits (106), Expect = 9e-15 Identities = 160/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || || ||||||||| | |||||||||||| | || ||||| || | ||| | || Sbjct 17788 GAGCGTCCCCAGCATATGCTCATGCGTGTTGCTGTCGGCATCCACGGCTCCGATATCGAG 17847 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTG-CTCGTGTA-TTCACGCACGCCACGCCAA 363565 || || || || || || ||| | || ||| || ||||| || || |||||| Sbjct 17848 CGGGCAATCGAGACTTACAA-CTTG-ATGTCTCTCCGTTACTTCACACATGCGTCGCCAA 17905 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | ||| ||| ||||| || | |||| ||| || || ||||| || | |||| Sbjct 17906 CGTTGTTCAACGCTGGTACACCACATCCGCAGCTGAGCTCGTGCTTCCTCGTCTGTATGA 17965 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGC 363671 ||||||| |||||||||||||||| ||||| || |||| ||||| Sbjct 17966 AGGACGACTCCATCGAGGGTATCTACGACACGCTCAAGAGCTGTGC 18011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303317229103196