Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1836 95.1 1e-14 >seq1836 Length=575610 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | || | || || || || || |||||||||||| Sbjct 191893 ATACCGCCACGGAGGCGAAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCG 191952 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| || || || || || ||| |||| | ||||| ||||| ||| Sbjct 191953 GACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGA 192012 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | |||| ||||||| || ||| Sbjct 192013 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCG 192072 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||| || ||||| || || || |||||||| Sbjct 192073 ACTTCGAGCGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||| ||||||||||| | || | || || | || || ||| Sbjct 190959 GTGGACTCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCGTCCTCCAACTGCTTCCCA 191018 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| ||||| || ||||| || || ||||| || || || Sbjct 191019 GCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATTTTCGCCTTG 191078 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| || ||||| || | || | ||| || ||||||| || Sbjct 191079 ACGTTGTCAATCGTGTCGGACGACTCGACCTCAAGAGTGATCGTCTTCCCGGTCAACGTC 191138 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || ||||||||||||||| || Sbjct 191139 TTCACAAAAATCTGCATGCCT 191159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420123247794936