Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 279 1e-69 seq1494 131 3e-25 >seq1 Length=925270 Score = 279 bits (308), Expect = 1e-69 Identities = 469/665 (71%), Gaps = 28/665 (4%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| | ||||||||| |||||| Sbjct 580182 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACTGTCGAGGAGATCGACCTG 580241 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA-----GTTT-TTCCTC 42413 | |||||| || |||| | || || ||| |||| || || ||| || Sbjct 580242 TCGAAGGACCTCCACGACTGGAACA-ACCGTATGA--ACGACAACGAGCGTCACTTCATC 580298 Query 42414 AAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACC 42473 || | || ||||| ||||| ||||||||||| || ||||| || ||||| | | Sbjct 580299 TCGCACGTCCTCGCCTTTTTCGCTGCCTCTGACGGTATTGTCAACGAAAACCTTGTCGAA 580358 Query 42474 AGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533 | ||| || ||||||||| |||||| || |||||||||||||||||||| Sbjct 580359 CGTTTCTCCAACGAGGTGCAGGCTGCTGAGGCACGATGCTTCTACGGCTTCCAGATCATG 580418 Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593 || |||||| | ||||| ||| ||| | || || |||| |||||| ||| ||| Sbjct 580419 ATGGAGAACATCCACTCCGAGACGTATTCGCTCCTCATCGACACCTACATCAAGGA-CCC 580477 Query 42594 GTCG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | | |||| | || ||| | ||||| || || || || |||||||| |||||||| Sbjct 580478 GAAGCAGCGCGAGCACCTCTTCGATGCCATCGACACCATCCCTTGCATCAAAAAGAAGGC 580537 Query 42653 GGACTGGGCGCTCAACTGGATCG-AGA-GTCCCGACGCAACGTTCGGCGAGAGGCTGGTA 42710 ||||||||| ||| |||||||| ||| | | | || | |||| |||| | || || Sbjct 580538 GGACTGGGCCCTCCGCTGGATCGCAGACGAGCGGTCG--AGCTTCGCCGAGCGTCTCGTC 580595 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 || || | ||||||||||| ||||||||||| ||| |||| || || |||||||||||| Sbjct 580596 GCTTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTTGCGTCGATCTTCTGGCTC 580655 Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || ||| || ||||| || ||||| ||||| ||||| || |||||| | ||||| Sbjct 580656 AAGAAGCGTGGTCTC-ATGCCTGGCCTCACGTTCTCTAACGAGCTGATCAGCCGTGACGA 580714 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC---- 42885 ||| |||| | ||||| || ||| | || ||| | |||||| | || | | Sbjct 580715 GGGCATGCACACCGACTTCGCTTGCTTGCTCTTC---ACCCACCTGAAGCGCCGTCCTCA 580771 Query 42886 CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCC 42945 || ||| | | || | ||||||||| ||||| || || |||||| |||||||| Sbjct 580772 CCCCGACGCA----GTGAAGCGCATCATCACCGAGGCTGTTGACATCGAGCAGGAGTTCT 580827 Query 42946 TCACG 42950 | ||| Sbjct 580828 TGACG 580832 Score = 206 bits (228), Expect = 5e-48 Identities = 319/450 (71%), Gaps = 4/450 (1%) Strand=Plus/Minus Query 42407 TTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCT 42466 |||| || | || | || ||||||||||| || || || |||||||| || |||||||| Sbjct 578772 TTTCATCTCACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATAGTGAACGAGAACCT 578713 Query 42467 GGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCA 42526 | | ||| ||| ||||||||| || || || || |||||||||||||| Sbjct 578712 CGTAGAGCGCTTCTCGAACGAGGTGCAGGCTGCGGAAGCACGGTGTTTCTACGGCTTCCA 578653 Query 42527 GATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCT 42586 || || |||||| | || || || ||| | || || | || |||||| Sbjct 578652 AATCATGATGGAGAACATACATTCCGAAACATACTCGCTCCTAATCGATACATACATCAA 578593 Query 42587 GGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646 ||| || || || || | || || | ||||| ||| | || || ||||||||||| Sbjct 578592 GGACCCGCAAGAACGCGACCGTCTATTTGACGCCATCGAGGCAATACCATGCATCAAGAA 578533 Query 42647 GAAGGCGGACTGGGCGCTCAACTGGATCG-AGAGTCCCGACGCAACGTTCGGCGAGAGGC 42705 ||||||||||||||| ||| |||||||| ||| || | | |||| ||| | | Sbjct 578532 GAAGGCGGACTGGGCTCTCCGCTGGATCGCAGACAAGCG-GTCGAGTTTCGCTGAGCGAC 578474 Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| ||||| ||||||| ||||||||||| ||||| ||| | |||||| |||| |||| Sbjct 578473 TGGTGGCCTTCGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGTTCGCCGCCATATTCT 578414 Query 42766 GGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||||||| | | | | | ||||||||||| || ||||| ||||| | || | | | Sbjct 578413 GGCTCAAG-AAACGCGGCCTCATGCCCGGACTGACATTCTCAAACGAGTTGATTATCCGC 578355 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGC 42854 |||||||| |||| | |||||| || ||| Sbjct 578354 GACGAGGGAATGCACACGGACTTCGCATGC 578325 Score = 107 bits (118), Expect = 4e-18 Identities = 130/174 (75%), Gaps = 10/174 (6%) Strand=Plus/Plus Query 42973 TCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT- 43030 ||||||||||| |||| ||||||||| |||||||| | | |||||| |||| ||||| Sbjct 580908 TCGGCATGAACG-CGACGCTCATGTGCCAGTACATCGAATTCGTCGCTGACCGGCTCCTT 580966 Query 43031 ---GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGA 43087 | || | || || || | |||||| | || |||||||||||| ||||| Sbjct 580967 GTCGCGCTCGGCGGCTCGAAGGTG----TACAACGTGACGAACCCCTTCGACTTCATGGA 581022 Query 43088 GAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTA 43141 | |||||| | |||||||||||||||| |||||||||||||| | ||||| Sbjct 581023 CATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTATCTGACTA 581076 >seq1494 Length=22227 Score = 131 bits (144), Expect = 3e-25 Identities = 213/303 (70%), Gaps = 8/303 (3%) Strand=Plus/Minus Query 244290 GTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGG 244349 || ||| ||||||| ||| |||||||| | || | | || || ||||||||||| | Sbjct 19161 GTGTGACACCCCACAGATCATACTGCAGCTGGCCTTGGGACACAGGACTGCCCTCGTACG 19102 Query 244350 TCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGA 244409 || ||| || || || || | | || |||| | |||| ||||||| ||| | Sbjct 19101 TCTCGTAAGGGCCATCAACGGCAGCGATGTCACTGCTCGCCTCGACCGCGGCGTGGTATA 19042 Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT-GAAGGGGATGCCC 244468 ||||||| ||| ||||||| | || || |||| | || || |||||| |||| Sbjct 19041 TGGTCTCCGCAATCTTCTTGTTTAGGTTACGCGCCTC-CGGCGAGTCGAAGGGCATGCGA 18983 Query 244469 ATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTG 244528 | ||||||| ||||||| || |||||||| ||||||||||| || | ||| ||| || Sbjct 18982 AGAGCCATGAAGGCGTCGGCGAGACCCTGCACACCGATGCCGATCGGGCGGTGGCGCATG 18923 Query 244529 TTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGG 244585 ||||| ||| || || || | |||||| ||||| ||||||| | ||||||| Sbjct 18922 TTGGACTTGCG---AGCCTCAGGGATGGGGTAGAAGTTCACGTCGATGATGCGGTTGAGG 18866 Query 244586 TTG 244588 ||| Sbjct 18865 TTG 18863 Score = 104 bits (114), Expect = 4e-17 Identities = 168/239 (70%), Gaps = 12/239 (5%) Strand=Plus/Minus Query 245015 AAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCA 245074 ||||| |||||||||||||| || | ||||||||| | || | || || |||| Sbjct 18356 AAGAGATCGGGGATCCAGAGTGCATAGAAGAGGTCGCGGGCACGGACTTCCTCTTTGCCA 18297 Query 245075 GTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACA 245134 ||||| | || || | || || ||||| ||| | ||||||||||| | ||||| | Sbjct 18296 TGATTCTTTCGGAGATCGAGGAACTCGAAGACATCGTCATGCCAGGGCTCGAGGTAGATA 18237 Query 245135 GCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAG----CGCGTT 245190 |||| |||||||| |||||||| || || |||| || | | ||| | ||||| Sbjct 18236 GCGAAAGCGCCGGGTCGCTTGTTACCACCTTGGT----CAACGTATCGGGCAGTCGCGT- 18182 Query 245191 GAAGATG--CGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTA 245247 | ||| ||||| ||||||| || ||||| |||| ||||| || ||| ||||| Sbjct 18181 -CATATGCACGCAGCATAGGCACAATACCGTTTGAGTAACCGTTCGTACCCGCAATGTA 18124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944313490365280