Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1362 87.8 2e-12 >seq1362 Length=45920 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 20486 TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGC 20545 ||||| | |||||||| || || || || || |||| |||| ||| ||||| ||| Sbjct 43328 TGGTCGACACCCTGGCCAGTGTAATCCGCGTCGCAGTCCGTGTACTTCGCGCCAAAATGC 43387 Query 20546 CTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGC 20605 ||||||||||| || || || || |||| ||||| ||||| ||||| | || || ||| Sbjct 43388 CTCCACTGGAAGCCATACACCGGCCCCAGGTCCCCTTCCCTCCTGTGGCCAAGCCCCCGC 43447 Query 20606 CCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 |||| |||||| || || || ||||| ||||||| Sbjct 43448 TTCTCCAGAAACTCCTTGCTCCCGTTCCCATCCCAGATCTTGA 43490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441360783625520