Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1836 154 3e-32 seq117 150 4e-31 seq1555 100 7e-16 seq1 87.8 4e-12 >seq1836 Length=575610 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||||| || || || ||||| || ||||| | |||||||| |||||||| | Sbjct 191687 CGAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCA 191746 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 | || || || || || ||||| ||||| ||| ||||| || || || ||||||| Sbjct 191747 ACTGCTTGCCCGCAAAAATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGA 191806 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | ||||| |||||||| || || | ||| ||| || |||||||||||||||||||| | Sbjct 191807 TCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGC 191866 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || |||||||||||||| || ||||| Sbjct 191867 CCGTGAGAGTCTTGACGAAGATTTGCAT 191894 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | ||| || || |||| ||| || || ||||| || || |||| Sbjct 191896 CCGCCACGGAGGCGAAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 191955 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || |||||||||| ||||| || ||| Sbjct 191956 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 192015 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | ||| ||| || ||| Sbjct 192016 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACT 192075 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||| || || |||||||| ||||| |||||||| Sbjct 192076 TCGAGCGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 138 bits (152), Expect = 3e-27 Identities = 158/211 (75%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||||| ||| || |||||||| || || || | ||||| | ||||| || | Sbjct 190948 CGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCGTCCTCCA 191007 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCT 288382 | || || || |||||||| |||||||| || |||||| || || || || |||| Sbjct 191008 ACTGCTTCCCAGCGAAGATGAGACGCTGCTGG---TCTGGGGGAATACCCTCCTTGTCCT 191064 Query 288383 GGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCT 288442 |||||||||| || ||||| || || | ||| ||| || || || || |||||||||| Sbjct 191065 GGATTTTCGCCTTGACGTTGTCAATCGTGTCGGACGACTCGACCTCAAGAGTGATCGTCT 191124 Query 288443 TCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||| ||||| || || |||||||| Sbjct 191125 TCCCGGTCAACGTCTTCACAAAAATCTGCAT 191155 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||| ||||||| ||||| || |||||||| || ||||| || |||||| Sbjct 191421 TCCTTCTGAATATTGTAGTCGGACAGCGTCCGGCCGTCTTCCAACTGTTTCCCGGCGAAG 191480 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| ||| ||||| || || ||||||||||| || || || ||||| Sbjct 191481 ATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCCTGGATCTTTGCCTTGACGTTG 191540 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| || || || || ||||| || ||||| || || || ||||||||| Sbjct 191541 TCGATGGTATCGGAGGACTCAACCTCCAGCGTTATGGTCTTTCCCGTGAGCGTCTTGACG 191600 Query 288463 AATATCTGCAT 288473 ||||| ||||| Sbjct 191601 AATATTTGCAT 191611 Score = 118 bits (130), Expect = 3e-21 Identities = 166/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | || |||||||| | ||| || || ||||| ||||||| Sbjct 191153 CATG-CCTCCACGAAGACGGAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTATAGT 191211 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || || || ||||| || | || || || |||||||| ||||| || || Sbjct 191212 CCGAAAGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGTTGCTGGTCGG 191271 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || ||||| ||||| ||||| || ||||| || || | || || | Sbjct 191272 GCGGGATACCCTCCTTATCTTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACT 191331 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | |||||| ||||||||||| || ||||| ||||| |||||||| Sbjct 191332 CGACCTCCAACGTGATGGTCTTCCCGGTAAGCGTCTTCACGAAGATCTGCAT 191383 >seq117 Length=384797 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| || | |||||| || || ||||| ||||| || | Sbjct 361459 CCGCCACGGAGACGCAGCACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAA 361518 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || || || || || ||||||||||| ||||| || | || Sbjct 361519 AGAGTACGGCCGTCCTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGA 361578 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || ||||| || ||||| || || | || ||| || || Sbjct 361579 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACC 361638 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||||||||||||||||| ||||||||||| ||||||||| Sbjct 361639 TCGAGAGTGATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCATT 361686 Score = 127 bits (140), Expect = 5e-24 Identities = 149/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || || || || || ||||| | || || || |||||||| | || || || Sbjct 361767 GTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTCGAGCTGCTTCCCA 361826 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCT 288393 |||||||| || ||||| || ||||| |||||| || || |||||||| ||||| Sbjct 361827 GCGAAGATGAGGCGCTGCTGG---TCTGGAGGGATTCCCTCCTTGTCCTGGATCTTCGCC 361883 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || ||||| || || | || || || || ||||| ||||| ||||||||||||| Sbjct 361884 TTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCCCGGTCAAC 361943 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||||||||| |||||||| Sbjct 361944 GTCTTGACGAAGATCTGCAT 361963 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 || |||| |||||| || || ||||| || ||||||| ||| || || || || || | Sbjct 362318 AGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTCAAGC 362377 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGG 288384 || || || |||||||| || ||||| ||| || ||| || || || ||||||||| Sbjct 362378 TGCTTACCAGCGAAGATGAGGCGCTGCTGA---TCCGGGGGAATACCCTCCTTATCCTGG 362434 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || || || ||||| || || | || || || || |||||||| || |||||| Sbjct 362435 ATCTTGGCCTTTACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTCTTC 362494 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||| || |||||||| Sbjct 362495 CCAGTGAGGGTCTTGACAAAGATCTGCAT 362523 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 ||||| | ||||| || || ||||| || ||||||| ||||||||| || || || | Sbjct 362040 AGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCGAGC 362099 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || || ||||||||||| || || | ||| || || || || || || || Sbjct 362100 TGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTGAATC 362159 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || || || || || || | || || || || || || || || ||||| || Sbjct 362160 TTTGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCTTGCCC 362219 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| |||||||| Sbjct 362220 GTAAGAGTCTTCACGAAGATCTGCAT 362245 >seq1555 Length=357173 Score = 100 bits (110), Expect = 7e-16 Identities = 177/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 326078 TCGGTCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG 326137 |||||||| | ||| | | || |||||||| | |||||| ||||| | || | Sbjct 287763 TCGGTCATCAACATGAGTCGTCCATAACGAAGACCAGCCGTGTCCTTGTAGTCCTTGTTG 287822 Query 326138 GTTTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGC 326196 || ||||||||||| | |||| | ||| ||| || ||||||||| |||| || Sbjct 287823 TGCTGCAGGCCGAGAATCTTCTTGATGTTCTG-GATCTCCTCGTTCTTCATGAT-CTGAT 287880 Query 326197 CACGGAT-GCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCT 326255 || | | |||||||||||||| | || ||||| || ||||||||||| ||| | | | Sbjct 287881 CATGCTTAGCATCGCGGACGTTGAGCAGCTTTCCGCGCAGAGGGAACACGCCAAAGTTAT 287940 Query 326256 CGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCA 326315 |||| ||||| || ||| || |||| || |||| | ||||| || || || || | Sbjct 287941 CGCGGCCGACGACACTCAGACCAGCGACAGCTAGTGACTTGGCGGAGTCTCCTTCTGTGA 288000 Query 326316 GAATGAGAGTGCA 326328 | || | ||||| Sbjct 288001 GGATCAACGTGCA 288013 >seq1 Length=925270 Score = 87.8 bits (96), Expect = 4e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| || |||||| || || ||||||||||| ||||| || || | Sbjct 580907 ATCGGCATGAACGCGACGCTCATGTGCCAGTACATCGAATTCGTCGCTGACCGGCTCCTT 580966 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 || ||||| ||| |||||||| || ||| ||||||| ||| ||||| | Sbjct 580967 GTCGCGCTCGGCGGCTCGAAGGTGTACAACGTGACGAACCCCTTCGACTTCATGGACATG 581026 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGT 269312 || |||||| | || ||||| ||||||||||| ||||| || Sbjct 581027 ATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGT 581067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179621481006684