Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 seq1121 82.4 9e-11 >seq1 Length=925270 Score = 131 bits (144), Expect = 2e-25 Identities = 340/508 (67%), Gaps = 19/508 (4%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||||||| ||| || || || ||||| || || ||||||||||| |||||| Sbjct 580717 CCCTCGTCACGGCTGATCAGCTCGTTAGAGAACGTGAGGCCAGGCATGAGACCACGCTTC 580658 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| |||| ||| || || ||||||||||| ||||| || ||||| Sbjct 580657 TTGAGCCAGAAGATCGACGCAAAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAA 580598 Query 126185 GCAAAGAGACGCTCAGCAAAG---GAGCGCGACTTTGTGTCAAACCACTTCATCGCCCAC 126241 || | ||||||||| || ||| || ||| | || | | ||| | ||||| Sbjct 580597 GCGACGAGACGCTCGGCGAAGCTCGACCGCTCGTCTG---CGATCCAGCGGAGGGCCCAG 580541 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTC 126300 | |||||| || | ||| || |||| ||| | ||| || || ||||| | || | | | Sbjct 580540 TCCGCCTTCTTTTTGATGCAAGGGATGGTGTCGATGGCATCGAAGAGGTGCTCGCGCTGC 580481 Query 126301 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TT 126359 | || || |||||||| | || ||||| ||||| || ||| ||||| | | Sbjct 580480 T-TCGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAATACGTCTCGGAGTGGATGTTCTC 580422 Query 126360 CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAA 126419 ||| || | ||| | ||||||| | || || || ||| ||||| | || | Sbjct 580421 CATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCAGCAGCCTGCACCTCGTTGG-AG 580364 Query 126420 AATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA 126476 || || | || | || || ||||| || || || |||| ||||| || |||| Sbjct 580363 AAACGT--TCGACAAGGTTTTCGTTGACAATACCGTCAGAGGCAGCGAAAAAGGCGAGGA 580306 Query 126477 TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCT 126533 | | ||||| | | || || ||||||| || | |||||||||| || |||| Sbjct 580305 CGTGCGAGATGAAGTGACGCTCGTTGTCGTTCATACGGTTGTTCCAGTCGTGGAGGTCCT 580246 Query 126534 TCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||| || || | |||||| ||||||| Sbjct 580245 TCGACAGGTCGATCTCCTCGACAGTCCA 580218 >seq1121 Length=1100126 Score = 82.4 bits (90), Expect = 9e-11 Identities = 134/190 (71%), Gaps = 10/190 (5%) Strand=Plus/Plus Query 10967 GCGTCAATTTCATCGATGAAAACGATACACG----GTTGATTTTCACGGGCAACTTCAAA 11022 ||||||||||| || ||||||||||| || ||| | ||| ||| | |||| Sbjct 614360 GCGTCAATTTCGTCAATGAAAACGATGGCCGGAGCGTTCTTCTTC----GCAGTTGCAAA 614415 Query 11023 GATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGA 11082 || ||| ||||||| | | ||| ||||| || ||||| || || || | || | ||| Sbjct 614416 GAGATCACGGACTCGCGATGAACCAACACCGACGAACATCTCGACGAACTCGGAGCCGG- 614474 Query 11083 ACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCC 11141 ||| | || ||||||||| || | || || || | || ||||||||| ||||| | Sbjct 614475 ACACGGAGAAGAAGGGGACATTCGCCTCCCCTGCAGTCGCCTTGGCGAGGAGTGTCTTAC 614534 Query 11142 CCGTCCCAGG 11151 |||| ||||| Sbjct 614535 CCGTACCAGG 614544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597337337048240