Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1494 100 3e-16 >seq1494 Length=22227 Score = 100 bits (110), Expect = 3e-16 Identities = 209/308 (68%), Gaps = 15/308 (5%) Strand=Plus/Plus Query 94528 GCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATT 94587 |||||||| |||||| || ||||||| ||||||| || ||||| ||||||||||| Sbjct 18678 GCCAAGTCTAACCAGAAGAACCTCGGCACGATCAAGTCGTCAAATCTCTGCACCGAGATC 18737 Query 94588 GTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCC 94647 |||||||| | || || || |||| || || || ||| ||| |||||| ||| | Sbjct 18738 ATCGAGTATTCGTCGCCAGATGAGACCGCCGTCTGCAACTTGGCGTCCATCTCCCTCCCG 18797 Query 94648 ACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAAC 94707 | ||| | ||||| || | | ||| |||| | ||| | || | || Sbjct 18798 TCATTCAT-CGAGA-GCGGA---GAGTACAACTTC-CAGAAGCTGCACGATATCACAAAG 18851 Query 94708 TTCGCGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTC 94767 ||| | | ||| ||||| ||| | | |||||| ||||||||||||| || Sbjct 18852 GTCG---------TTGCCTTCAACCTCAACCGCATCATCGACGTGAACTTCTACCCCATC 18902 Query 94768 CCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTC 94827 || ||||| || || ||| || || || || ||||||||||| || |||||| || Sbjct 18903 CCTGAGGCTCGCAAGTCCAACATGCGCCACCGCCCGATCGGCATCGGTGTGCAGGGTCTC 18962 Query 94828 GCGGACGC 94835 || ||||| Sbjct 18963 GCCGACGC 18970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494709731160880