Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 seq1121 86.0 8e-12 >seq1 Length=925270 Score = 131 bits (144), Expect = 2e-25 Identities = 340/508 (67%), Gaps = 19/508 (4%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||||||| ||| || || || ||||| || || ||||||||||| |||||| Sbjct 580717 CCCTCGTCACGGCTGATCAGCTCGTTAGAGAACGTGAGGCCAGGCATGAGACCACGCTTC 580658 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| |||| ||| ||||||||||||||||| ||||| || ||||| Sbjct 580657 TTGAGCCAGAAGATCGACGCAAAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAA 580598 Query 127658 GCAAATAGACGCTCGGCAAAG---GAGCGGGACTTTGTATCAAACCACTTCATCGCCCAC 127714 || | ||||||||||| ||| || || | || | | ||| | ||||| Sbjct 580597 GCGACGAGACGCTCGGCGAAGCTCGACCGCTCGTCTG---CGATCCAGCGGAGGGCCCAG 580541 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTC 127773 | ||||| || | ||| || |||| ||| | ||| || || ||||| | || | | | Sbjct 580540 TCCGCCTTCTTTTTGATGCAAGGGATGGTGTCGATGGCATCGAAGAGGTGCTCGCGCTGC 580481 Query 127774 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TT 127832 | || || |||||||| | || ||||| ||||| || ||| ||||| | | Sbjct 580480 T-TCGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAATACGTCTCGGAGTGGATGTTCTC 580422 Query 127833 CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAA 127892 ||| || | ||| | ||||||| | || || || ||| ||||| | || | Sbjct 580421 CATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCAGCAGCCTGCACCTCGTTGG-AG 580364 Query 127893 AATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA 127949 || || | || | || || ||||| || || || |||| ||||| || |||| Sbjct 580363 AAACGT--TCGACAAGGTTTTCGTTGACAATACCGTCAGAGGCAGCGAAAAAGGCGAGGA 580306 Query 127950 TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCT 128006 | | ||||| | | || || ||||||| || | |||||||||| ||| |||| Sbjct 580305 CGTGCGAGATGAAGTGACGCTCGTTGTCGTTCATACGGTTGTTCCAGTCGTGGAGGTCCT 580246 Query 128007 TTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | || || || | |||||| ||||||| Sbjct 580245 TCGACAGGTCGATCTCCTCGACAGTCCA 580218 >seq1121 Length=1100126 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/190 (71%), Gaps = 10/190 (5%) Strand=Plus/Plus Query 12882 GCGTCAATTTCGTCAATGAAAACGATACACG----GTTGATTTTCACGGGCAACTTCAAA 12937 |||||||||||||||||||||||||| || ||| | ||| ||| | |||| Sbjct 614360 GCGTCAATTTCGTCAATGAAAACGATGGCCGGAGCGTTCTTCTTC----GCAGTTGCAAA 614415 Query 12938 GATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGA 12997 || ||| || |||| | | ||| ||||| || |||||||| || || | || | ||| Sbjct 614416 GAGATCACGGACTCGCGATGAACCAACACCGACGAACATCTCGACGAACTCGGAGCCGG- 614474 Query 12998 ACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCC 13056 ||| | || ||||||||| || | || || || | || ||||||||| ||||| | Sbjct 614475 ACACGGAGAAGAAGGGGACATTCGCCTCCCCTGCAGTCGCCTTGGCGAGGAGTGTCTTAC 614534 Query 13057 CCGTCCCTGG 13066 |||| || || Sbjct 614535 CCGTACCAGG 614544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613490497266480