Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 132 8e-26 >seq1 Length=925270 Score = 132 bits (146), Expect = 8e-26 Identities = 322/486 (66%), Gaps = 4/486 (1%) Strand=Plus/Plus Query 159906 GGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACT 159965 ||| || | | || | ||| || ||||| ||||| ||||||||| || || |||| Sbjct 578309 GGTGCTGATAGAGCAAGCATGCGAAGTCCGTGTGCATTCCCTCGTCGCGGATAATCAACT 578368 Query 159966 CGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAA 160025 |||| || | | || || ||||||| || || |||||||| || ||||| || | Sbjct 578369 CGTTTGAGAATGTCAGTCCGGGCATGAGGCCGCGTTTCTTGAGCCAGAATATGGCGGCGA 578428 Query 160026 AAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAG 160085 | | ||| |||||||| ||||||||||| || || ||||| || | |||| | ||| Sbjct 578429 ACGAGCCGGAGAAAAAGATGCCCTCCACGGCGGCGAAGGCCACCAGTCGCTCAGCGAAAC 578488 Query 160086 AGG--CGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGG 160143 | || | |||| | |||| | ||||| || |||||||| |||||| || Sbjct 578489 TCGACCGCT--TGTCTGCGATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCATGG 578546 Query 160144 CATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGC 160203 || ||||| ||||| ||| | | ||| | || | | |||||||| ||| | Sbjct 578547 TATTGCCTCGATGGCGTCAAATAGACGGTCGCGTTCTTGCGGGTCCTTGATGTATGTATC 578606 Query 160204 AATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAA 160263 || || |||||| |||| | || | || || || || || ||| |||||| Sbjct 578607 GATTAGGAGCGAGTATGTTTCGGAATGTATGTTCTCCATCATGATTTGGAAGCCGTAGAA 578666 Query 160264 ATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAAC 160323 | | || ||| | ||||||||| | | ||| | | | || || | || || Sbjct 578667 ACACCGTGCTTCCGCAGCCTGCACCTCGTTCGAGAAGCGCTCTACGAGGTTCTCGTTCAC 578726 Query 160324 CAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTT 160383 | || |||| || || ||||| || | ||||| ||||||||||||| |||||| | Sbjct 578727 TATGCCATCGGATGCAGCGAAGAAGGCGAGGACGTGTGAGATGAAATGTCGCTCGTCGTC 578786 Query 160384 GTTGAG 160389 |||||| Sbjct 578787 GTTGAG 578792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795133551899680