Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1121 118 1e-21 seq1 87.8 2e-12 >seq1121 Length=1100126 Score = 118 bits (130), Expect = 1e-21 Identities = 223/322 (69%), Gaps = 11/322 (3%) Strand=Plus/Plus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG----- 11646 |||||||||||| || ||| |||||||||| ||| | || |||||||||||| Sbjct 614266 GAAACCGTCCATCTCGACGAGCAGCTGGTTGAGCGTGTTCTCCCGCTCATCGTTGCCACC 614325 Query 11647 GAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706 ||| | | | | ||| ||| ||| || | ||||||||| || || ||||| ||| Sbjct 614326 GAGCGAACGCTTCGAGCC--ACGAGCCTTGCCAATAGCGTCAATTTCGTCAATGAAAACG 614383 Query 11707 ATACACGGTTGGTTGGCACGTGCCTGTTCGAAA-AGTTCACGTACACGCTTCGCTCCAAC 11765 || ||| ||| | | | ||| ||| || ||||| || ||| | ||||| Sbjct 614384 ATGGCCGGAGCGTTCTT-CTTCGCAGTTGCAAAGAGATCACGGACTCGCGATGAACCAAC 614442 Query 11766 ACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACT 11824 ||| ||||||||||| ||||| | | | | || ||| || | |||||| ||||| | || Sbjct 614443 ACCGACGAACATCTCGACGAACTCGGAGCCGGA-CACGGAGAAGAAGGGGACATTCGCCT 614501 Query 11825 CACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGG 11884 | || || | || |||||||| ||||||||||||||||| | || | | | || Sbjct 614502 CCCCTGCAGTCGCCTTGGCGAGGAGTGTCTTACCCGTACCAGGCGGTCCGGATAAGATGG 614561 Query 11885 CGCCACGGGGGATCTTGGCACC 11906 |||| || || ||||| || || Sbjct 614562 CGCCGCGAGGAATCTTCGCGCC 614583 >seq1 Length=925270 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/216 (70%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 ||| ||||| ||| ||| || ||||||||||| || | ||||| ||||| ||||| Sbjct 580703 GATCAGCTCGTTAGAGAACGTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGAT 580644 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTC 119647 | ||| ||||| |||||||| ||||| || |||||||||| |||||||| Sbjct 580643 CGACGCAAAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAAGCGACGAGACGCTC 580584 Query 119648 AGCAAAAGGTCGA-GACTTGT---CGAACCACTTGAGAGCCCAGTTGGCCTTACGCTCTA 119703 || ||| |||| || || ||| ||| ||| ||||||| ||||| | | Sbjct 580583 GGC-GAAGCTCGACCGCTCGTCTGCGATCCAGCGGAGGGCCCAGTCCGCCTTCTTTTTGA 580525 Query 119704 TGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCT 119739 |||| |||| || | |||||| ||||| || |||| Sbjct 580524 TGCAAGGGATGGTGTCGATGGCATCGAAGAGGTGCT 580489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588959965128400