Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 9e-11 >seq1 Length=925270 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 ||||| || ||| || || || || ||||| ||||| ||||||||||| |||||| Sbjct 580717 CCCTCGTCACGGCTGATCAGCTCGTTAGAGAACGTGAGGCCAGGCATGAGACCACGCTTC 580658 Query 117352 TTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410 || | ||| | || | |||| || || || ||||||||||||||||| || || || Sbjct 580657 TTGAGCCAGAAGATCGACGCA-AAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAA 580599 Query 117411 CGCAAAAAGGCGCTCGGCGAAG 117432 || | || |||||||||||| Sbjct 580598 AGCGACGAGACGCTCGGCGAAG 580577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589964737772720