Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq117 154 3e-32 seq1836 147 5e-30 >seq117 Length=384797 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||| || ||| ||| || ||||| ||||| || | || || | ||| ||||||| Sbjct 361756 CAAGGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTCGA 361815 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| || || || ||||||||||| || || || ||||| || | Sbjct 361816 GCTGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGA 361875 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||||||| || |||||||||||| ||||| || ||||| | ||||| | Sbjct 361876 TCTTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCC 361935 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || ||||| | ||||| Sbjct 361936 CGGTCAACGTCTTGACGAAGATCTGCAT 361963 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| || |||||| ||| || || || ||||| |||| || || | ||||| |||| Sbjct 362038 CAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCGA 362097 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || || ||||| || ||||| ||||| || ||||| || || |||||||||| Sbjct 362098 GCTGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTGAA 362157 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | ||| |||||| || || |||||||| ||| || || |||||||||| ||||| | Sbjct 362158 TCTTTGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCTTGC 362217 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | ||| || ||||| | ||||| Sbjct 362218 CCGTAAGAGTCTTCACGAAGATCTGCAT 362245 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || || || || ||||| | |||||| | || || || Sbjct 361477 ACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTACGGCCGTCCTCC 361536 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| || |||||||| || || || ||||| || |||||||| || ||||| ||| Sbjct 361537 AACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGA 361596 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || || || | |||||| Sbjct 361597 ATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGAGTGATCGTCTTC 361656 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || ||||| || || ||||| | |||||| Sbjct 361657 CCGGTCAACGTCTTGACGAAGATCTGCATT 361686 Score = 123 bits (136), Expect = 6e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||||||||| ||| ||| || || || ||||| |||| || || | ||||| || | Sbjct 362316 CAAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTCAA 362375 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||||||| |||||||| || || || || || || ||||| || || || || || | Sbjct 362376 GCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGA 362435 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| ||||| || |||||||||||| ||||| || || |||| ||||| | Sbjct 362436 TCTTGGCCTTTACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTCTTCC 362495 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || || || || | ||||| Sbjct 362496 CAGTGAGGGTCTTGACAAAGATCTGCAT 362523 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || ||||| ||| ||| || ||||| ||||| || | |||||| | |||||| |||||| Sbjct 362602 AGATGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGCCCATCCTCGAGC 362661 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||| || |||||||| || || || ||||| || || || Sbjct 362662 TGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGAT 362702 >seq1836 Length=575610 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || || || |||||||||| || || | ||||| ||| Sbjct 191914 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCCTCG 191973 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || ||||| ||||| ||||| || ||||| || Sbjct 191974 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 192033 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| ||||| ||||| || || ||||| || || | |||||| Sbjct 192034 ATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTG 192093 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 192094 CCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || ||||||||||| |||| || || | || ||||| Sbjct 191403 ACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGACAGCGTCCGGCCGTCTTCC 191462 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||| || || |||||||| || || || || || ||||| ||||| || || || || Sbjct 191463 AACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCCTGG 191522 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||||||||| || ||||| || || || || || || || | |||||| Sbjct 191523 ATCTTTGCCTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCCAGCGTTATGGTCTTT 191582 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 191583 CCCGTGAGCGTCTTGACGAATATTTGCAT 191611 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| || | || || | ||||| ||| Sbjct 192142 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCG 192201 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || |||||||| || || || ||||| ||||| |||| Sbjct 192202 AGCTGCTTTCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGC 192247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109450639222526