Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq117 116 2e-21 seq1836 104 2e-17 >seq117 Length=384797 Score = 116 bits (128), Expect = 2e-21 Identities = 157/215 (73%), Gaps = 9/215 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||||| || ||||| ||||| ||||| || || | || |||| || Sbjct 362036 ACCAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTC 362095 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || || ||||||||||| | || | ||||||||||| Sbjct 362096 GAGCTGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTG 362155 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| ||||| || | ||||| ||| | |||||| || | ||| || | Sbjct 362156 AATCTTTGCCTTGAC--AT--TGTCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAG 362211 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || ||||| ||||||||||| |||||||||||| Sbjct 362212 TCTTGCCCGTAAGAGTCTTCACGAAGATCTGCATA 362246 Score = 104 bits (114), Expect = 2e-17 Identities = 154/215 (72%), Gaps = 9/215 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | |||||| || ||||||||||| ||||| || ||| | || | || || Sbjct 361754 ACCAAGGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTC 361813 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || ||||||||| | || | ||||||||||| Sbjct 361814 GAGCTGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTG 361873 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947 |||||| ||||| | | ||||| | ||| | ||| || |||| ||| || | Sbjct 361874 GATCTTCGCCTTGAC----GTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAG 361929 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || | ||||| || |||||||||||| Sbjct 361930 TCTTCCCGGTCAACGTCTTGACGAAGATCTGCATA 361964 Score = 100 bits (110), Expect = 2e-16 Identities = 144/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| |||||||| |||||||| | || | || |||| ||| || || Sbjct 361489 GTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTACGGCCGTCCTCCAACTGCTTGCCA 361548 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || |||||||| |||| | ||||||||||| ||||||| ||| Sbjct 361549 GCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTG 361608 Query 34905 ACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || | | ||||| | ||| | |||||| |||| || || || || || || | Sbjct 361609 AC----GTTGTCGATGGTGTCCGACGACTCAACCTCGAGAGTGATCGTCTTCCCGGTCAA 361664 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 ||||| || ||||||||||| Sbjct 361665 CGTCTTGACGAAGATCTGCAT 361685 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/214 (70%), Gaps = 9/214 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| ||||| || ||||| ||||| ||||| || || | || |||| || Sbjct 362314 ACCAAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTC 362373 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || ||||| || | || | |||||||| || Sbjct 362374 AAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCCTG 362433 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947 ||||| || ||| | ||||| | ||| | ||| || |||| || |||| Sbjct 362434 GATCTTGGCCTTTACGT----TGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGG 362489 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || ||||| ||||| |||||||||||||| Sbjct 362490 TCTTCCCAGTGAGGGTCTTGACAAAGATCTGCAT 362523 >seq1836 Length=575610 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||||||||||||||| | || | || || ||||| || || || || Sbjct 191193 TCCTTCTGGATGTTATAGTCCGAAAGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAG 191252 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| |||| | |||||||| || |||||| |||||| Sbjct 191253 ATGAGACGTTGCTGGTCGGGCGGGATACCCTCCTTATCTTGGATCTTCGCCTTGACGTTG 191312 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | || ||||| || || || || |||||||| Sbjct 191313 TCGATCGTGTCCGAAGACTCGACCTCCAACGTGATGGTCTTCCCGGTAAGCGTCTTCACG 191372 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 191373 AAGATCTGCATA 191384 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| || || || ||| | || |||| || ||||| Sbjct 191919 GTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCCTCGAGCTG 191978 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || | || |||||||| | || | ||||||||||| ||||| Sbjct 191979 CTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 192038 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 | || ||| | |||| || | ||| || |||| || || || || ||||| Sbjct 192039 CGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCCGT 192098 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 ||||||||| || ||||||||||| Sbjct 192099 GAGAGTCTTAACGAAGATCTGCAT 192122 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || ||||| || || | || | || |||| |||||| ||||| || Sbjct 191421 TCCTTCTGAATATTGTAGTCGGACAGCGTCCGGCCGTCTTCCAACTGTTTCCCGGCGAAG 191480 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | |||||||| || ||||| |||||| Sbjct 191481 ATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCCTGGATCTTTGCCTTGACGTTG 191540 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || |||||| || | |||||||| ||||||||||| ||||| || Sbjct 191541 TCGATGGTATCGGAGGACTCAACCTCCAGCGTTATGGTCTTTCCCGTGAGCGTCTTGACG 191600 Query 34971 AAGATCTGCAT 34981 || || ||||| Sbjct 191601 AATATTTGCAT 191611 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || | || |||| ||| || || ||||| Sbjct 191704 TCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCAACTGCTTGCCCGCAAAA 191763 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||| || ||| Sbjct 191764 ATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 191823 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| || || || || |||||||||||||| || Sbjct 191824 TCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCCGTGAGAGTCTTGACG 191883 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 191884 AAGATTTGCATA 191895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324624982803984