Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1376 87.8 1e-11 >seq1376 Length=507094 Score = 87.8 bits (96), Expect = 1e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | ||||| || || || || |||||| ||||||| ||||| || || |||| Sbjct 265172 ATGCTGTCGTCACTGTCCCTGCTTACTTCAATGACGCACAACGGCAAGCAACGAAGGATG 265231 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || | || || || | |||| |||||| | ||||| || || ||||||||||| | Sbjct 265232 CGGGCCAGATCGCAGGCTTGGATGTCCTTCGTGTCATCAACGAGCCGACTGCTGCTGCCC 265291 Query 550518 TTGCATATGGACTTGA 550533 |||| || || || || Sbjct 265292 TTGCCTACGGGCTCGA 265307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029180817537220