Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 197 3e-45 >seq1 Length=925270 Score = 197 bits (218), Expect = 3e-45 Identities = 442/653 (68%), Gaps = 18/653 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| ||||||||||||||||| | ||| |||||| | ||| ||||| || ||| Sbjct 580182 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACTGTCGAGGAGATCGACCTG 580241 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTC-TATCCA--AAGACGAGCAGCATTTTCTCAAG 25593 | |||||| | ||| |||| || | ||| | | |||||| || || || | Sbjct 580242 TCGAAGGACCTCCACGACTGGAACAACCGTATGAACGACAACGAGCGTCACTTCATCTCG 580301 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || || || || |||||||| ||||| || ||||| || || ||| | Sbjct 580302 CACGTCCTCGCCTTTTTCGCTGCCTCTGACGGTATTGTCAACGAAAACCTTGTCGAACGT 580361 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| ||| || |||||| | ||||| || |||||||| |||||||| || Sbjct 580362 TTCTCCAACGAGGTGCAGGCTGCTGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 580421 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| ||| |||| | ||| || || || ||||| | ||| | Sbjct 580422 GAGAACATCCACTCCGAGACGTATTC---GCTCCTCATCGACACCTACATCAAGGACC-C 580477 Query 25771 GCCG-AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 | | || | || | || || | ||||||||| ||| || ||||||| | |||||| Sbjct 580478 GAAGCAGCGCGAGCACCTCTTCGATGCCATCGACACCATCCCTTGCATCAAAAAGAAGGC 580537 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT--ACGTTTGGCGAGCGGCTGGTA 25887 | |||||| | |||||| ||| | ||||| | | || | |||||| || || Sbjct 580538 GGACTGGGCCCTCCGCTGGATCG-CAGAC-GAGCGGTCGAGCTTCGCCGAGCGTCTCGTC 580595 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 || || ||||| || ||||| ||||| ||| || || |||||| | |||||||||||| Sbjct 580596 GCTTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTTGCGTCGATCTTCTGGCTC 580655 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || |||||| || || || || |||||||| |||||| | |||||| Sbjct 580656 AAGAAGCGTGGTCTCATGCCTGGCCTCACGTTCTCTAACGAGCTGATCAGCCGTGACGAG 580715 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | |||| || || || ||| |||||| ||| |||| || | | ||| Sbjct 580716 GGCATGCACACCGACTTCGCTTGCTTGCTCTTCAC---CCACCTGAAGCGCCGTCCTCAC 580772 Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | || | || | | ||||||| |||||||| || |||||| ||||||| Sbjct 580773 CCCGACGCAGTGAAGCGCATCATCACCGAGGCTGTTGACATCGAGCAGGAGTT 580825 Score = 185 bits (204), Expect = 2e-41 Identities = 397/577 (69%), Gaps = 25/577 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| ||||||||| | || | ||| |||||| || |||||||| |||||| Sbjct 578882 ATATGGCGCATGTACAAGCAAGCGGAGGCCTCTTTCTGGACAGCAGAAGAGATAGATCTG 578823 Query 25537 GCCAAGGACA--TGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTT--TCT 25589 | | ||| ||| | |||| || || ||| ||||| ||| |||| ||| Sbjct 578822 TCGCACGACCACTGG--GACTGGAACCATCGCCTCAACGACGACGAGCGACATTTCATCT 578765 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649 || |||| | || ||||| || || || ||||| |||||||||||||| || || Sbjct 578764 CAC--ACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATAGTGAACGAGAACCTCGTAGA 578707 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | | ||| | | || |||||| | ||| || |||||||||||| ||||| || Sbjct 578706 GCGCTTCTCGAACGAGGTGCAGGCTGCGGAAGCACGGTGTTTCTACGGCTTCCAAATCAT 578647 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA 25766 || || || | || || || || | ||| || || || ||||| | || Sbjct 578646 GATGGAGAACATACATTCCGAAACATACTC---GCTCCTAATCGATACATACATCAAGGA 578590 Query 25767 CGTCGCC-GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 | ||| || | || || || |||| ||||||||| ||||| ||||||||| || Sbjct 578589 CC-CGCAAGAACGCGACCGTCTATTTGACGCCATCGAGGCAATACCATGCATCAAGAAGA 578531 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTAC-GTTTGGC-GAGCGGCT 25883 ||||| ||||| | |||||| ||| || |||| | |||| || ||||| || Sbjct 578530 AGGCGGACTGGGCTCTCCGCTGGATCG-CAGACA-AGCGGTCGAGTTTCGCTGAGCGACT 578473 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 ||| ||||| || || |||||||||||||||||| ||| ||||| || ||||| ||||| Sbjct 578472 GGTGGCCTTCGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGTTCGCCGCCATATTCTG 578413 Query 25944 GCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 ||||||| | | | || | ||||||||| ||| || || |||||| | || | | | | Sbjct 578412 GCTCAAG-AAACGCGGCCTCATGCCCGGACTGACATTCTCAAACGAGTTGATTATCCGCG 578354 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 ||||||| | |||| || || || ||| ||||||| Sbjct 578353 ACGAGGGAATGCACACGGACTTCGCATGCTTGCTCTA 578317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928819512200320