Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1555 158 1e-33 >seq1555 Length=357173 Score = 158 bits (174), Expect = 1e-33 Identities = 195/264 (74%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||| || || ||||||||||| | || | |||| ||| ||||| |||||| || Sbjct 193707 GATCAGGTCCGTCTCCGGGTTCTTGCACGACTTGCACAGCACGAACTTCTCGATGAAGCC 193766 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || ||||| || | | ||| || |||||||| ||||||||||||| | || ||||| Sbjct 193767 GTCGAGCAGCTCGCGCAGCTTCGTGGCGTCGTGGGCGCCGTTGACGATGTAGCGGTCGTT 193826 Query 34431 TTTGTAATCGACCTGCGTT-TGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAA 34489 || | ||| || | | ||||| || |||||||| |||||| |||| |||||||| | Sbjct 193827 CTTCTCGTCG-CCGGTGACCTGCGCACCGAGCTCGCAGCCGAAGAACTTGGTCGGGTACA 193885 Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 ||| ||| || | |||||| ||||| |||| ||| ||| | ||| || ||||||| Sbjct 193886 TGGGCGGCCGACTGAGCGCCCGGGCGACGTCGGACATATTGGGTACGACGGTTTTGATGC 193945 Query 34550 CGTTGCCCTTTCCTTCGACCTTGG 34573 |||| ||||| ||||||| ||||| Sbjct 193946 CGTTACCCTTGCCTTCGATCTTGG 193969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412830641377754