Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 185 1e-40 seq1494 96.9 5e-14 seq1312 87.8 3e-11 >seq1 Length=925270 Score = 185 bits (204), Expect = 1e-40 Identities = 239/327 (73%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||||| ||||| || |||||| |||||||| || |||||| Sbjct 580717 CCCTCGTCACGGCTGATCAGCTCGTTAGAGAACGTGAGGCCAGGCATGAGACCACGCTTC 580658 Query 794401 TTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 |||||||| ||||| | || ||| ||| ||||| ||||| ||||||||||| || || Sbjct 580657 TTGAGCCAGAAGATCG-ACGCAAAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAA 580599 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 ||||||| |||||||| || | | | | ||| | ||||| | ||||| Sbjct 580598 AGCGACGAGACGCTCGGCGAAGCTCGACCGCTCGTCTGCG---ATCCAGCGGAGGGCCCA 580542 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 || ||||| || | | | || | ||||||||||| |||||||| || || Sbjct 580541 GTCCGCCTTCTTTTTGATGCAAGGGATGGTGTCGATGGCATCGAAGAGGTGCTCGCGCTG 580482 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 ||||||||||| ||||||||||||||||||||| || ||||| ||||||||||| || Sbjct 580481 CTTCGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAATACGTCTCGGAGTGGATGTTCTC 580422 Query 794640 GATGGCGATCTGGAAGCCATAAAAGCA 794666 || |||||||||||| || ||||| Sbjct 580421 CATCATGATCTGGAAGCCGTAGAAGCA 580395 Score = 161 bits (178), Expect = 2e-33 Identities = 235/328 (72%), Gaps = 7/328 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| | ||||| ||||| || || ||||||||||||||||| ||| Sbjct 578347 CCCTCGTCGCGGATAATCAACTCGTTTGAGAATGTCAGTCCGGGCATGAGGCCGCGTTTC 578406 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| || ||||| ||| ||| ||||||||||||||||| |||||||| ||| Sbjct 578407 TTGAGCCAGAATATGGCGGCGAACGAGCCGGAGAAAAAGATGCCCTCCACGGCGGCGAAG 578466 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | || || ||||| || ||| || | | | | || |||||| | ||||| Sbjct 578467 GCCACCAGTCGCTCAGCGAAA--CTCGACCGCTTGTCTG-CGATCCAGCGGAGAGCCCAG 578523 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGT--CCTTCT 794578 || ||||| ||| | | | || | | ||||||||| ||| || ||| | |||| Sbjct 578524 TCCGCCTTCTTCTTGATGCATGGTATTGCCTCGATGGCGTCAAATAGACGGTCGCGTTCT 578583 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | ||||||||||| ||| || ||||| ||||||||||| || || || || ||||| | Sbjct 578584 TG--CGGGTCCTTGATGTATGTATCGATTAGGAGCGAGTATGTTTCGGAATGTATGTTCT 578641 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || ||| |||||||| || || || Sbjct 578642 CCATCATGATTTGGAAGCCGTAGAAACA 578669 Score = 150 bits (166), Expect = 3e-30 Identities = 150/193 (78%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| |||||||| |||| || |||||| |||||| |||||||||||||||| || Sbjct 581093 TGACACCCGCCTTCCCATAGTCAGATACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGA 581034 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGC---TTCTCGCACC 794007 ||||||||| ||||| | ||| ||||| ||||| || || | ||| || | Sbjct 581033 GCGAGATCATGTCCATGAAGTCGAAGGGGTT---CGTCACGTTGTACACCTTCGAGCCGC 580977 Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067 |||||| |||| || ||||| ||||||||||| ||||||||||||||||| | |||| Sbjct 580976 CGAGCGCGACAAGGAGCCGGTCAGCGACGAATTCGATGTACTGGCACATGAGCGTCGCGT 580917 Query 794068 TCATGCCGATGAG 794080 ||||||||||||| Sbjct 580916 TCATGCCGATGAG 580904 Score = 149 bits (164), Expect = 1e-29 Identities = 152/197 (77%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || ||||||||||| || || || ||| |||||| |||||||||||||||| |||| Sbjct 577974 ACCCCCGCCTTGGCGTAGTCTGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGC 578033 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGC 794012 ||||||| ||||| | |||||| || | | ||||||| |||||| || ||| Sbjct 578034 GAGATCATGTCCATGAAATCGAACGGATTCGTTGCGTGGTAGTGTTTCTCGTTGCCCAGC 578093 Query 794013 GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATG 794072 || | ||||| | ||||||||||||||| |||||||||| |||||| ||||||||| Sbjct 578094 GAAACCAGCAGCCTGTCGGCGACGAATTCGATGTACTGGCGCATGAGCTGCGCGTTCATG 578153 Query 794073 CCGATGAGCGC-CACGG 794088 || || ||||| ||||| Sbjct 578154 CCAATCAGCGCGCACGG 578170 Score = 98.7 bits (108), Expect = 2e-14 Identities = 159/221 (72%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||||| || || | | || ||||| ||| |||||| | | |||||||| | Sbjct 578665 AAACACCGTGCTTCCGCAGCCTGCACCTCGTTCGAGAAGCGCTCTACGAGGTTCTCGTTC 578724 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 || ||||| ||| || ||||| |||||||||||||| ||| || || ||||||||| Sbjct 578725 ACTATGCCATCGGATGCAGCGAAGAAGGCGAGGACGTGTGAGATGAAATGTCGCTCGTCG 578784 Query 796261 TCGCTGA-GCGA--GACCCAGTGGACCGT-GTCG-GCGCCGAGGTCGACCTCCTCGGCGG 796315 ||| ||| |||| | ||||| | || |||| ||| | || || | ||| || || | Sbjct 578785 TCGTTGAGGCGATGGTTCCAGT-CCCAGTGGTCGTGCGAC-AGATCTATCTCTTCTGCTG 578842 Query 796316 TCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 |||| || |||||||| || | |||||||| ||||||| Sbjct 578843 TCCAGAAAGAGGCCTCCGCTTGCTTGTACATGCGCCATATC 578883 >seq1494 Length=22227 Score = 96.9 bits (106), Expect = 5e-14 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2070133 AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGC 2070192 || |||||||| || |||||||| |||| ||| ||||| |||||||||| ||| || | Sbjct 18973 AAGGCGTCGGCGAGACCCTGCACACCGATGCCGATCGGGCGGTGGCGCATGTTGGACTTG 18914 Query 2070193 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 || ||||| || | |||||| ||| | |||||| | ||||||||||||| Sbjct 18913 CGAGCCTCAGGGATGGGGTAGAAGTTCACGTCGATGATGCGGTTGAGGTTG 18863 >seq1312 Length=50105 Score = 87.8 bits (96), Expect = 3e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||||||| | ||||| |||| |||||||| || || ||||||| || | ||||| Sbjct 22327 GCCTCGGTGGCAATGCGCTCGAATATGTCGTTTACGAAGGAGTTCAATATGGCCATCGCC 22268 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| || ||||| |||||||||||||||||| || || Sbjct 22267 TTGTTAGAAATGCCAGTGTCGGGGTGCACCTGCTTAAGAAC 22227 Score = 86.0 bits (94), Expect = 1e-10 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 |||||| || | ||| || ||||| |||| |||||| |||| ||||| || | | ||| Sbjct 40775 CTTGGTTACAGACTTCGTTCCCTCAGAGATAGCGTGCTTGGCGAGTTCACCAGGAAGGAT 40716 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCG 1485560 |||||| |||||||||||||||||||| Sbjct 40715 CAGGCGGACGGCGGTCTGGATCTCGCG 40689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916014716206142