Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1362 129 7e-25 >seq1362 Length=45920 Score = 129 bits (142), Expect = 7e-25 Identities = 179/248 (72%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| || |||||||| ||| | | |||||||| |||| | || ||||| Sbjct 43325 AGCTGGTCGACACCCTGGCCAGTGTAATCCGCGTCGCAGTCCGTGTACTTCGCGCCAAAA 43384 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 ||||||||||||||||| ||||| ||||||||||| || | | ||||| | ||||| Sbjct 43385 TGCCTCCACTGGAAGCCATACACCGGCCCCAGGTCCCCTTCCCTCCTGTG-GCCAAGCC- 43442 Query 147352 GCCCGCTT---GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408 ||||||| |||||||| | ||||| | |||||||| | ||||| || Sbjct 43443 -CCCGCTTCTCCAGAAACTCCTTGCTCCCGTTCCCATCCCAGATCTTGATGCCCTTCGCC 43501 Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468 || | ||| || |||||||| || | |||||||| || |||||||||| || || Sbjct 43502 GACAAAAGCTTCGAATCCGTGGAACCGTGAATGAACCACAGGAGCTCCTCCAGAATACCG 43561 Query 147469 CTCCAAAA 147476 | |||||| Sbjct 43562 CGCCAAAA 43569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583472114539200