Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1836 131 2e-25 seq117 111 2e-19 seq1666 82.4 8e-11 >seq1836 Length=575610 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || ||||| ||||| || |||||||| ||| Sbjct 191896 CCGCCACGGAGGCGAAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 191955 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || ||||| |||||||| ||||| || Sbjct 191956 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 192015 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | ||||||||||| || || Sbjct 192016 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACT 192075 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | ||| |||||||| || ||||| Sbjct 192076 TCGAGCGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 122 bits (134), Expect = 9e-23 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCG 134564 |||| || || || || ||||| || ||||||||||| | || | ||| | ||| || Sbjct 191687 CGAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGC-GTGCGGCCGTCTTCC 191745 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||| ||||| |||||||||| |||||||||||||| || ||||| || || || || Sbjct 191746 AACTGCTTGCCCGCAAAAATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGG 191805 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||||||||| || || ||||| || || || || Sbjct 191806 ATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTG 191865 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || ||||| |||||||| Sbjct 191866 CCCGTGAGAGTCTTGACGAAGATTTGCAT 191894 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| ||||| ||||||||| | || | ||| || Sbjct 191403 ACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGACAGCGTCCGGCCGTCTTCC 191462 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | |||||| || || || || | |||||||||||||| || ||||| || || || || Sbjct 191463 AACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCCTGG 191522 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| ||||| ||| | || ||||| || || || || || || ||||| || Sbjct 191523 ATCTTTGCCTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCCAGCGTTATGGTCTTT 191582 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| |||||||| Sbjct 191583 CCCGTGAGCGTCTTGACGAATATTTGCAT 191611 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 |||| || || ||||| |||||||| |||||||| || || || ||| || | Sbjct 190948 CGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCGTCCTCCA 191007 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 ||| || || || || || | ||||||||| || || || || || || || || || | Sbjct 191008 ACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGA 191067 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 |||| ||||| ||| | ||||||||||| || || || ||||| || || || | Sbjct 191068 TTTTCGCCTTGACGTTGTCAATCGTGTCGGACGACTCGACCTCAAGAGTGATCGTCTTCC 191127 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| || || || || ||||| ||||| Sbjct 191128 CGGTCAACGTCTTCACAAAAATCTGCAT 191155 >seq117 Length=384797 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 134523 TCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||| || |||||||||||| | ||| || || |||||||| ||||| ||||| Sbjct 362055 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCGAGCTGCTTGCCAGCAAAG 362114 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 |||| ||| ||||| || || || || || || || |||||||| ||| ||||| | Sbjct 362115 ATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTGAATCTTTGCCTTGACATTG 362174 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||| || || || || || || ||||| || || || || | ||| || ||| Sbjct 362175 TCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCTTGCCCGTAAGAGTCTTCACG 362234 Query 134703 AAAATTTGCAT 134713 || || ||||| Sbjct 362235 AAGATCTGCAT 362245 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||| ||||| |||||||||||||| | ||| | ||| |||||| Sbjct 361758 AGGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTCGAGC 361817 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || || || | |||||||| || || || || || || || || || || Sbjct 361818 TGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGATC 361877 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | ||||| || || ||||| ||||| || || || || ||| Sbjct 361878 TTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCCCG 361937 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| || ||||| Sbjct 361938 GTCAACGTCTTGACGAAGATCTGCAT 361963 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| |||||| ||||| || |||||||||||| | || || || || ||| Sbjct 362318 AGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTCAAGC 362377 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || || || | ||||||||||| || || || || || || || || || Sbjct 362378 TGCTTACCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGATC 362437 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || ||| | ||||| || || ||||| ||||| |||||||| || || Sbjct 362438 TTGGCCTTTACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTCTTCCCA 362497 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || || || ||||| Sbjct 362498 GTGAGGGTCTTGACAAAGATCTGCAT 362523 >seq1666 Length=152845 Score = 82.4 bits (90), Expect = 8e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | |||||| ||||| ||||| || ||||||||||| | | ||| || Sbjct 77719 AGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCACTGAGAGTGCGA 77778 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||| || ||||| ||||| || || ||||| ||||| || ||||| || |||| Sbjct 77779 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCGGGAGGGATGC 77833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505384640528560