Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1836 107 2e-18 seq117 82.4 6e-11 >seq1836 Length=575610 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||||||| | || | || | || || || || ||||||||||||||| | Sbjct 191385 CCACCGCGCAACCGGAGGACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGAC 191444 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || ||||||| | |||||| |||||| | ||||| ||||| ||||| || || Sbjct 191445 AGCGTCCGGCCGTCTTCCAACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 191504 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| || | | | || | || || | || ||||| Sbjct 191505 ATGCCCTCCTTATCCTGGATCTTTGCCTTGACGTTGTCGATGGTATCGGAGGACTCAACC 191564 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| | || ||||| || || || || || |||||||| Sbjct 191565 TCCAGCGTTATGGTCTTTCCCGTGAGCGTCTTGACGAATATTTGCAT 191611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| || |||| ||||||| | ||| || || Sbjct 191698 GTTGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCAACTGCTTGCCC 191757 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || |||| || ||||| ||||| || || | ||||| || || |||||| ||| Sbjct 191758 GCAAAAATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 191817 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || ||||| || || || | |||||||| ||||| Sbjct 191818 ACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCCGTGAGAGTC 191877 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 191878 TTGACGAAGATTTGCATA 191895 >seq117 Length=384797 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| |||||||| || | | ||| ||||||||||||| || || ||| | Sbjct 361773 TCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTCGAGCTGCTTCCCAGCGAAG 361832 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| ||||| || || || || | ||||| || || |||||| || | | | Sbjct 361833 ATGAGGCGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 361892 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || |||| || || |||| || || || Sbjct 361893 TCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCCCGGTCAACGTCTTGACG 361952 Query 27237 AAGATTTGCATAGCT 27251 ||||| |||||| || Sbjct 361953 AAGATCTGCATACCT 361967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424923120381936