Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 seq1121 93.3 5e-14 >seq1 Length=925270 Score = 131 bits (144), Expect = 2e-25 Identities = 171/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTA 94768 |||| ||||| || |||||| | || | || || || ||||||| ||||| ||||| Sbjct 580489 AGCACCTCTTCGATGCCATCGACACCATCCCTTGCATCAAAAAGAAGGCGGACTGGGCCC 580548 Query 94769 TGAAGTGGTTTGATACAAAGTCGCGTTC---CTTTGCTGAGCGACTCTTCGCATTTGCGT 94825 | ||| | | || | ||| || ||| || ||||| ||| |||| || || Sbjct 580549 TCCGCTGGATCG---CAGACGAGCGGTCGAGCTTCGCCGAGCGTCTCGTCGCTTTCGCTG 580605 Query 94826 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 94884 || |||||||||||||||||||| ||||| |||| | || | |||||||||||||| Sbjct 580606 CCGTCGAGGGTATCTTCTTCTCTGGCTCCTT-TGCGTCGATCTTCTGGCTCAAGAAGCGT 580664 Query 94885 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||||||||||| || ||| ||||| |||||||| ||| ||||||||||| Sbjct 580665 GGTCTCATGCCTGGCCTCACGTTCTCTAACGAGCTGATCAGCCGTGACGAGGG 580717 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 || ||||| |||||| | || | || || || | ||||| ||||| |||||| | Sbjct 578570 CTATTTGACGCCATCGAGGCAATACCATGCATCAAGAAGAAGGCGGACTGGGCTCTCCGC 578511 Query 94774 TGGTTTG-ATACAAA--GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | | | |||| |||| ||| | ||||||||||| | || || || || Sbjct 578510 TGGATCGCAGACAAGCGGTCGAGTTTC---GCTGAGCGACTGGTGGCCTTCGCCGCCGTG 578454 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 ||||| ||||| ||||| || || ||| ||| || | ||||||||||| || || ||| Sbjct 578453 GAGGGCATCTTTTTCTCCGGCTCGTTCGCCGCCATATTCTGGCTCAAGAAACGCGGCCTC 578394 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||| || || ||||| |||||| | || || ||||||||| | ||| Sbjct 578393 ATGCCCGGACTGACATTCTCAAACGAGTTGATTATCCGCGACGAGGGAATGCAC 578340 >seq1121 Length=1100126 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/229 (70%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGCGAGCGACTTCAAA 9759 || ||||| || |||||||| |||||| || || | ||||| || | |||| Sbjct 614360 GCGTCAATTTCGTCAATGAAAACGATGGCCGGAGCGTTCTTCTTCGC-AGT---TGCAAA 614415 Query 9760 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819 |||||| || || ||| | || ||||| || |||||||| || || | | | |||| Sbjct 614416 GAGATCACGGACTCGCGATGAACCAACACCGACGAACATCTCGACGAACTCGGAGCCGGA 614475 Query 9820 ACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 9878 || | || |||||||||||| | || || ||| | || |||||| || ||||||| Sbjct 614476 -CACGGAGAAGAAGGGGACATTCGCCTCCCCTGCAGTCGCCTTGGCGAGGAGTGTCTTAC 614534 Query 9879 CCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||||||| ||| || | | || ||| || || |||||||| ||||| Sbjct 614535 CCGTACCAGGCGGTCCGGATAAGATGGCGCCGCGAGGAATCTTCGCGCC 614583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583244920724720