Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1494 199 4e-46 seq1 187 3e-42 >seq1494 Length=22227 Score = 199 bits (220), Expect = 4e-46 Identities = 425/631 (67%), Gaps = 18/631 (3%) Strand=Plus/Plus Query 19841 GCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATC 19900 |||||||| || ||||||||| ||||| ||||||||||||| || || || || || ||| Sbjct 18678 GCCAAGTCTAACCAGAAGAACCTCGGCACGATCAAGTCGTCAAATCTCTGCACCGAGATC 18737 Query 19901 ATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCG 19960 || ||| ||| ||| || ||||| ||||| || || |||||||| | | ||| ||| Sbjct 18738 ATCGAGTATTCGTCGCCAGATGAGACCGCCGTCTGCAACTTGGCGTCCATCTCCCTCCCG 18797 Query 19961 ACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTC 20020 | ||| || || | | | |||| || || |||| | || |||||| Sbjct 18798 TCATTCATCGAGAGCGGAGAGTACAACTTCCAGAAGCTGCACGATATCACAAAGGTCGTT 18857 Query 20021 ACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAG 20080 | || || || ||| ||||||| |||||| ||||| | | | ||| |||||| Sbjct 18858 GCCTTCAACCTCAACCGCATCATCGACGTGAACTTCTACCCCATCCCTGAGGCTCGCAAG 18917 Query 20081 TCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATG 20140 || || ||||||||||| ||||||| ||||| || ||||| || ||||||| |||||| Sbjct 18918 TCCAACATGCGCCACCGCCCGATCGGCATCGGTGTGCAGGGTCTCGCCGACGCCTTCATG 18977 Query 20141 ATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAG 20200 || || | | |||||| || ||||||| | || |||||| || ||| Sbjct 18978 GCTCTTCGCATGCCCTTCGACTCGCCGGAGGCGCGTAACCTAAACAAGAAGATTGCGGAG 19037 Query 20201 GCCGTGTACCACGCGGCCCTCCTGGAATCGTGC---GAACTCGCCAAAGAGGACGGCCCG 20257 || | |||||||| || || || || || || |||| | || ||||| Sbjct 19038 ACCATATACCACGCCGCGGTC---GAGGCGAGCAGTGACATCGCTGCCGTTGATGGCCCT 19094 Query 20258 TACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGC 20317 |||||||||| | |||| || | |||| | || || ||| || ||||||| Sbjct 19095 TACGAGACGTACGAGGGCAGTCCTGTGTCCCAAGGCCAGCTGCAGTATGATCTGTGGGGT 19154 Query 20318 GTCACTGAGAATGAGTTTTG-----GAGCG-CCCTCAAGGTTGAGAT---CAAGACCCAC 20368 ||||| | || || || | ||| | || |||| || | ||||| Sbjct 19155 GTCACACCCACAGATTTGTGGGACTGGGCGTCGCTGAAGGAGAAGGTGGCAAAGAC---T 19211 Query 20369 GGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATG 20428 || || | |||||| ||||||| ||||| |||||||| || ||||| |||||| || Sbjct 19212 GGTCTCAGGAACTCGCTGCTCGTTGCGCCTATGCCGACGGCGTCGACGAGTCAGATCTTG 19271 Query 20429 GGGAACAACGAGGCTTTCGAGCCGTACACGA 20459 || || |||||| |||||||| ||||||| Sbjct 19272 GGCAATAACGAGTGCTTCGAGCCTTACACGA 19302 Score = 192 bits (212), Expect = 6e-44 Identities = 418/622 (67%), Gaps = 18/622 (3%) Strand=Plus/Minus Query 78545 TCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCA 78604 ||||||| |||||||| |||||| || |||| |||||| ||||| || ||||||| Sbjct 19302 TCGTGTAAGGCTCGAAGCACTCGTTATTGCCCAAGATCTGACTCGTCGACGCCGTCGGCA 19243 Query 78605 TGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTG---ATCTCGACCTTTAG-- 78659 | || || || || || || |||| |||||| ||||| | || |||| || Sbjct 19242 TAGGCGCAACGAGCAGCGAGTTCCTGAGACCA---GTCTTTGCCACCTTCTCCTTCAGCG 19186 Query 78660 --GCC--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCT 78715 ||| |||||| || || | | | || ||||||| || || || || | Sbjct 19185 ACGCCCAGTCCCACAAATCTGTGGGTGTGACACCCCACAGATCATACTGCAGCTGGCCTT 19126 Query 78716 CGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC---GC 78772 |||| | || |||| | |||||||||||| || || | |||| || || Sbjct 19125 GGGACACAGGACTGCCCTCGTACGTCTCGTAAGGGCCATCAACGGCAGCGATGTCACTGC 19066 Query 78773 ATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCG 78832 | ||||| | || |||||||| | | ||| || |||||| || | |||| Sbjct 19065 TCGCCTCGACC---GCGGCGTGGTATATGGTCTCCGCAATCTTCTTGTTTAGGTTACGCG 19009 Query 78833 CCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGC 78892 ||| | | |||||| | | || || ||||||| | ||||| || ||||| || | Sbjct 19008 CCTCCGGCGAGTCGAAGGGCATGCGAAGAGCCATGAAGGCGTCGGCGAGACCCTGCACAC 18949 Query 78893 CGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGT 78952 |||| ||||||| ||||||||||||||| ||| || ||| | | | ||||| |||| Sbjct 18948 CGATGCCGATCGGGCGGTGGCGCATGTTGGACTTGCGAGCCTCAGGGATGGGGTAGAAGT 18889 Query 78953 TCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGG 79012 || ||||||| |||||| ||||| | |||||| || | |||| || || Sbjct 18888 TCACGTCGATGATGCGGTTGAGGTTGAAGGCAACGACCTTTGTGATATCGTGCAGCTTCT 18829 Query 79013 CGAAATCAAAATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACA 79072 ||| | | | | | |||||| | ||| ||| | | || |||| |||||| | Sbjct 18828 GGAAGTTGTACTCTCCGCTCTCGATGAATGACGGGAGGGAGATGGACGCCAAGTTGCAGA 18769 Query 79073 CGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGA 79132 |||| ||||| || || ||| ||||||||| || ||||| | ||| |||||||||| Sbjct 18768 CGGCGGTCTCATCTGGCGACGAATACTCGATGATCTCGGTGCAGAGATTTGACGACTTGA 18709 Query 79133 TGGTGCCGATGTTCTTCTGGTT 79154 | ||||||| |||||||||||| Sbjct 18708 TCGTGCCGAGGTTCTTCTGGTT 18687 Score = 120 bits (132), Expect = 3e-22 Identities = 165/227 (73%), Gaps = 8/227 (4%) Strand=Plus/Minus Query 79692 CTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGC---A 79748 ||||||||| |||||||| |||||||| ||||||||||||||| ||| ||||||| | Sbjct 18003 CTTGAGCGTGTCGTAGATACCCTCGATGGAGTCGTCCTTCATACAGACGAGGAAGCACGA 17944 Query 79749 GCTCGACATCTGTGGGT-TGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGA 79807 ||| || ||| || | || | ||||| |||||||| | || |||| ||| || |||| Sbjct 17943 GCT---CAGCTGCGGATGTGGT-GTACCAGCGTTGAACAACGTTGGCGACGCATGTGTGA 17888 Query 79808 AGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGA 79867 || | | ||||| | ||| ||||| | | ||| || ||| |||||||| Sbjct 17887 AGTAACGGAGAGACATCAAGTTGTAAGTCTCGATTGCCCGCTCGATATCGGAGCCGTGGA 17828 Query 79868 TGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTCGCCGACA 79914 ||||||| || || ||||||| | | |||||| ||| |||||| Sbjct 17827 TGCCGACAGCAACACGCATGAGCATATGCTGGGGACGCTCCCCGACA 17781 Score = 114 bits (126), Expect = 1e-20 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||||| |||| |||||||| |||||||| | ||||||||||| ||||| | ||| Sbjct 19722 GGCGCGTG--CGCAGGTAGTACATCCCCGTCTTCAACCCCTTCTTCCAGCCGTAGAAGTG 19665 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| |||| ||||| ||| |||| || || | | |||||| ||| ||| Sbjct 19664 CATGCTCGTCAGCTGGGCGGTCGTCGGCGACTGCAGGTGCACGTTGAGGCTCTGACTCTG 19605 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||| ||| |||| ||||||||||| |||||||||| | | ||| || |||||||| Sbjct 19604 GTCAATGAACGCGCCGCGGTCGGCAGCCATGTCGAGAATCTTCTTCTGGCTGATCTCCCA 19545 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTCTTCCTGGATG 78399 | ||| ||| || ||||| | || || ||||| Sbjct 19544 AACCGTCTTGTAGATCGCCTTGACGTCGTCAGGGATG 19508 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| || || ||||||||||| ||| ||| || ||| | |||||| ||| Sbjct 17807 TCATGCGTGTTGCTGTCGGCATCCACGGCTCCGATATCGAGCGGGCAATCGAGACTTACA 17866 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 || ||||| | | |||||| || ||| |||| || | |||||||| ||||| | Sbjct 17867 ACTTGATGTCTCTCCGTTACTTCACACATGCGTCGCCAACGTTGTTCAACGCTGGTAC-A 17925 Query 19236 ACA-ACCCGCAGATG---TCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291 || | |||||| || ||| || ||||| || ||||||||| ||| ||| ||| Sbjct 17926 CCACATCCGCAGCTGAGCTCG---TGCTTCCTCGTCTGTATGAAGGACGACTCCATCGAG 17982 Query 19292 GGCATCTACGAGACGCTCAAG 19312 || |||||||| ||||||||| Sbjct 17983 GGTATCTACGACACGCTCAAG 18003 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446 ||||| || |||||||| || || ||||||||||||| ||| | ||||| | ||| Sbjct 18356 AAGAGATCGGGGATCCAGAGTGCATAGAAGAGGTCGCGGGCACGGACTTCCTCTTTGCCA 18297 Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506 || ||| || || ||||| || || | || ||| | ||||| ||||| || ||||| Sbjct 18296 TGATTCTTTCGGAGATCGAGGAACTCGAAGACATCGTCATGCCAGGGCTCGAGGTAGATA 18237 Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566 ||||| | || |||||| || || |||| ||||| ||||| || || | Sbjct 18236 GCGAAAGCGCCGGGTCGCTTGTTACCACCTTGGTCAACGTATCGGGCAGTCGCGTCATAT 18177 Query 79567 ACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCC 79610 | || ||||| ||||| || |||| | | |||||||| || Sbjct 18176 GCACGCAGCATAGGCACAATACCGTTTGAGTAACCGTTCGTACC 18133 >seq1 Length=925270 Score = 187 bits (206), Expect = 3e-42 Identities = 357/516 (69%), Gaps = 24/516 (5%) Strand=Plus/Plus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAG-ACCTGAAGGATTGGGACAAGC- 59670 || |||||| | ||||||||||| ||||| | || || |||| | || ||| |||| | Sbjct 580212 TCTTTCTGGACTGTCGAGGAGATCGACCT-GTCGAAGGACCTCCACGACTGGAACAACCG 580270 Query 59671 --TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGA 59728 | || || |||||| || |||||| | ||||| ||||| ||||| || ||| Sbjct 580271 TATGAACGACAACGAGCGTCACTTCATCTCGCACGTCCTCGCCTTTTTCGCTGCCTCTGA 580330 Query 59729 TGGAATTGTGATGGAAAATATAGACATGAACTTTTC--CAAGGATGTCCAGATTGCCGAG 59786 || ||||| | ||||| | | | |||| |||| ||| || || ||| ||| ||| Sbjct 580331 CGGTATTGTCAACGAAAACCTTGTC--GAACGTTTCTCCAACGAGGTGCAGGCTGCTGAG 580388 Query 59787 GCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCG 59846 || || | ||||||| | ||| | | ||| ||||||||||||||||| ||| Sbjct 580389 GCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACGTATTCG 580448 Query 59847 CTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATA 59906 ||| | ||||| | | ||||||| ||| | || | || ||| |||||| Sbjct 580449 CTCCTCATCGACACCTACATCAAGGACCCGAAGCAGCGCGAGCACCTCTTCGATGCCATC 580508 Query 59907 GAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGAT-------GA 59958 || || |||| ||| | ||| | || || || |||||| | | ||||| || Sbjct 580509 GACACCATCCCTTGCA-TCAAAAAGAAGGCGGACTGGGCCCTCCGCTGGATCGCAGACGA 580567 Query 59959 GTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCT 60018 | | |||| || || | |||||| | ||||| || ||| || || ||||||| Sbjct 580568 GCGGTCGAGCTTC----GCCGAGCGTCTCGTCGCTTTCGCTGCCGTCGAGGGTATCTTCT 580623 Query 60019 TCTCTGGCTCGTTCTGTG-CTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTG 60077 |||||||||| || || | | || ||||||||||| |||||||| |||||||| ||||| Sbjct 580624 TCTCTGGCTCCTT-TGCGTCGATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTC 580682 Query 60078 AGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 | ||||| ||||||||||| ||| ||||||||| Sbjct 580683 ACGTTCTCTAACGAGCTGATCAGCCGTGACGAGGGC 580718 Score = 123 bits (136), Expect = 3e-23 Identities = 349/528 (66%), Gaps = 10/528 (2%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGA-GAC 59651 |||| ||| ||||| | || |||||| | | || ||||| || || | || | ||| Sbjct 578872 TGTACAAGCAAGCGGAGGCCTCTTTCTGGACAGCAGAAGAGATAGATCT-GTCGCACGAC 578814 Query 59652 CTGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTG 59708 | ||| ||| || | | |||| ||||||||| ||||||||| ||||| Sbjct 578813 CACTGGGACTGGAACCATCGCCTCAACGACGACGAGCGACATTTCATCTCACACGTCCTC 578754 Query 59709 GCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAG 59768 ||||||||||| || ||||| || |||| || || | | | ||| || || Sbjct 578753 GCCTTCTTCGCTGCATCCGATGGCATAGTGAACGAGAACCTCGTAGAGCGCTTCTCGAAC 578694 Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATC 59828 || || ||| ||| || || |||| ||||||| | || | | ||| || Sbjct 578693 GAGGTGCAGGCTGCGGAAGCACGGTGTTTCTACGGCTTCCAAATCATGATGGAGAACATA 578634 Query 59829 CACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCT 59888 || ||||| || ||||||||| | ||||||| | ||||||| ||| |||| | Sbjct 578633 CATTCCGAAACATACTCGCTCCTAATCGATACATACATCAAGGACCCGCAAGAACGCGAC 578574 Query 59889 GGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCAT 59947 |||| || ||||| ||| | | || ||| | || | || || || ||||| | Sbjct 578573 CGTCTATTTGACGCCATCGAGGCAATACCATGCA-TCAAGAAGAAGGCGGACTGGGCTCT 578515 Query 59948 GCAGTGGATG--AGTCCTGGAGCATCATTT-GCACAACGTCTCATAGCTTTTGCATGCGT 60004 | ||||| || | | | ||| || | || || | || || || ||| Sbjct 578514 CCGCTGGATCGCAGACAAGCGGTCGAGTTTCGCTGAGCGACTGGTGGCCTTCGCCGCCGT 578455 Query 60005 GGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCT 60064 ||| || ||||| ||||| ||||||||| || || ||||||||||| || || ||||| Sbjct 578454 GGAGGGCATCTTTTTCTCCGGCTCGTTCGCCGCCATATTCTGGCTCAAGAAACGCGGCCT 578395 Query 60065 CATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 |||||| || |||| ||||| |||||| ||||| ||| |||||||| Sbjct 578394 CATGCCCGGACTGACATTCTCAAACGAGTTGATTATCCGCGACGAGGG 578347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548509866412320