Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1362 87.8 2e-12 >seq1362 Length=45920 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 |||||||| | ||||| || | || ||||| |||| || |||| ||| ||||| Sbjct 43325 AGCTGGTCGACACCCTGGCCAGTGTAATCCGCGTCGCAGTCCGTGTACTTCGCGCCAAAA 43384 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCT-CCTCCCGAGATGGGAA-CC 6971 || ||||||||||| || || ||||| |||| ||| || | ||||| | | | || || Sbjct 43385 TGCCTCCACTGGAAGCCATACACCGGCCCCAGGTCCCCTTCCCTCCTGTG--GCCAAGCC 43442 Query 6972 CCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG 7031 ||||||| |||||||| || ||||| | ||||||||||| | ||| | || Sbjct 43443 CCCGCTTCTCCAGAAACTCCTTGCTCCCGTTCCCATCCCAGATCTTGATGCCCTTCGCCG 43502 Query 7032 AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTC 7080 | | ||| | | ||||| || | ||||||||| |||||||| Sbjct 43503 ACAAAAGCTTCGAATCCGTGGAACCGTGAATGAACCACAGGAGCTCCTC 43551 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34265 GAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGG 34324 |||||||| ||||||||| | || ||||| | | ||| | ||| | ||| Sbjct 43551 GAGGAGCTCCTGTGGTTCATTCACGGTTCCACGGATTCGAAGCTTTTGTCGGCGAAGGGC 43492 Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG-TTCCCATC 34383 | ||||||||||| | ||||| || |||||||| ||||||||| || | | Sbjct 43491 ATCAAGATCTGGGATGGGAACGGGAGCAAGGAGTTTCTGGAGAAGCGGGGGCTTGGC--C 43434 Query 34384 TCGGGAGG-AGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGG 34442 | ||||| | || ||| |||| ||||| || || ||||||||||| || ||||| ||| Sbjct 43433 ACAGGAGGGAAGGGGACCTGGGGCCGGTGTATGGCTTCCAGTGGAGGCATTTTGGCGCGA 43374 Query 34443 AGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT 34491 |||| || |||| ||||| || | || ||||| | |||||||| Sbjct 43373 AGTACACGGACTGCGACGCGGATTACACTGGCCAGGGTGTCGACCAGCT 43325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448250196056160