Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1836 188 2e-42 seq117 181 2e-40 seq679 98.7 2e-15 >seq1836 Length=575610 Score = 188 bits (208), Expect = 2e-42 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| |||||||| || |||||||| ||||| | ||||| | ||||| Sbjct 191911 AGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCC 191970 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||| || ||||| ||||| | || ||||||||| Sbjct 191971 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 192030 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || || ||||| || || || ||||| ||||||||| Sbjct 192031 TGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTC 192090 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||||||||| || || | |||||| Sbjct 192091 TTGCCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || ||||| |||||||| ||||||||||| ||||||| ||| ||||| || || |||| | Sbjct 190950 AGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCGTCCTCCAAC 191009 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || |||||||| || || || ||||| || |||| || |||||||||||||| Sbjct 191010 TGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATT 191069 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || ||||| || || ||||| || || ||||| |||||||||||||| || Sbjct 191070 TTCGCCTTGACGTTGTCAATCGTGTCGGACGACTCGACCTCAAGAGTGATCGTCTTCCCG 191129 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || | ||||| ||||| | |||||| Sbjct 191130 GTCAACGTCTTCACAAAAATCTGCAT 191155 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || ||||| || || || || || || | || |||| || ||| Sbjct 191400 AGGACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGACAGCGTCCGGCCGTCT 191459 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||| || || |||||||| ||||| || || || ||||| | || ||||| ||| Sbjct 191460 TCCAACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCC 191519 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| |||||||| || ||| |||||||| || || || ||| Sbjct 191520 TGGATCTTTGCCTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCCAGCGTTATGGTC 191579 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| ||||| || || | ||||| Sbjct 191580 TTTCCCGTGAGCGTCTTGACGAATATTTGCAT 191611 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || ||||| || ||||| || |||||||| || || | || || | || ||||||| | Sbjct 191689 AGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCAAC 191748 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| || || || ||||| || || || ||||| | || ||||||||||||||| Sbjct 191749 TGCTTGCCCGCAAAAATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATC 191808 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || |||||||| || || ||||| || || || ||||| ||||||||||| ||| Sbjct 191809 TTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCC 191868 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| || || | ||||| Sbjct 191869 GTGAGAGTCTTGACGAAGATTTGCAT 191894 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | ||||| || || || || ||||| || ||||||||||| |||| ||| Sbjct 191159 TCCACGAAGACGGAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTATAGTCCGAAAG 191218 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | || || || |||||||| || |||||||| || ||||| ||||| || || | Sbjct 191219 AGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGTTGCTGGTCGGGCGGGAT 191278 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||| || |||||||| || ||||| ||||| ||||| || || ||||| Sbjct 191279 ACCCTCCTTATCTTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTC 191338 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| || || || ||||| || || | |||||| Sbjct 191339 CAACGTGATGGTCTTCCCGGTAAGCGTCTTCACGAAGATCTGCAT 191383 >seq117 Length=384797 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||||||||||| ||| || | || || Sbjct 361474 AGCACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTACGGCCGTCC 361533 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| ||||| || |||||||| |||| || ||||||||| Sbjct 361534 TCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCC 361593 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| || ||||||||||||||||||||| Sbjct 361594 TGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGAGTGATCGTC 361653 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || | ||||| || || | ||||||| Sbjct 361654 TTCCCGGTCAACGTCTTGACGAAGATCTGCATT 361686 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| || ||| ||| || || ||||| || || | ||||||| || ||||| | Sbjct 361756 CAAGGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTCGA 361815 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || |||||||| ||||| || ||||| ||||| | ||| ||||||||||||| Sbjct 361816 GCTGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGA 361875 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || ||||| ||||||||||| || || |||||||| ||||| ||||| | Sbjct 361876 TCTTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCC 361935 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | ||||| || || | |||||| Sbjct 361936 CGGTCAACGTCTTGACGAAGATCTGCAT 361963 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || |||||| ||| || |||||||| || || | || || | ||||| || | Sbjct 362038 CAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCGA 362097 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| || ||||| || ||||| |||||||| |||| || |||||||| || | Sbjct 362098 GCTGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTGAA 362157 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| || || || |||||||||||||| |||||||| || || || ||||| | Sbjct 362158 TCTTTGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCTTGC 362217 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| |||||||| || || | |||||| Sbjct 362218 CCGTAAGAGTCTTCACGAAGATCTGCAT 362245 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||||||||| ||| ||| || |||||||| || || | || |||| ||||| || | Sbjct 362316 CAAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTCAA 362375 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || |||||||| ||||| || || || || |||| || ||||| ||||||| Sbjct 362376 GCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGA 362435 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || ||||| ||||||||||| || || |||||||| || || ||||| | Sbjct 362436 TCTTGGCCTTTACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTCTTCC 362495 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| ||||| | |||||| Sbjct 362496 CAGTGAGGGTCTTGACAAAGATCTGCAT 362523 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||| ||||||||||| |||||||| ||||||||||||||| || |||||| Sbjct 362773 CCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCGACCTCG 362832 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || ||||| ||||| ||||| | |||||| Sbjct 362833 AGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 362876 >seq679 Length=256444 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| |||||||||||||| || ||||| Sbjct 229369 CCCTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTGTCAGAAGACTCCACCTCA 229428 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||||||||| |||||||| ||||| || || | |||||| Sbjct 229429 AGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 229472 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| || |||||||| || |||| ||||| | || || Sbjct 229206 AGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 229265 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||||||||||||||| ||||| || ||||| || || Sbjct 229266 TCGAGCTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCTGGGGG 229309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159119653138970