Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq117 136 9e-27 seq1836 116 9e-21 >seq117 Length=384797 Score = 136 bits (150), Expect = 9e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 ||||||| ||||| ||| || ||||||||||| |||| | || | ||||| || | Sbjct 362038 CAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCGA 362097 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| || | |||||||| | | || || ||||| ||||||| Sbjct 362098 GCTGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTGAA 362157 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| |||||| | || | | |||| ||| ||| || ||||| |||||||| |||| Sbjct 362158 TCTTTGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCTTGC 362217 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| |||||||||||||||| |||||| Sbjct 362218 CCGTAAGAGTCTTCACGAAGATCTGCAT 362245 Score = 91.5 bits (100), Expect = 3e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||| || ||||||||||| |||| | || | ||||| || | Sbjct 362316 CAAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTCAA 362375 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | |||||| |||| | || || ||||| || || | Sbjct 362376 GCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGA 362435 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | |||| ||| ||| || || || ||||| || || | Sbjct 362436 TCTTGGCCTTTACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTCTTCC 362495 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 362496 CAGTGAGGGTCTTGACAAAGATCTGCAT 362523 >seq1836 Length=575610 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || ||||| || |||||||||||||||| | || | ||||| Sbjct 191911 AGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCC 191970 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | ||||||||| | | ||| || ||||| || Sbjct 191971 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 192030 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | |||| || ||| ||||| || || || || Sbjct 192031 TGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTC 192090 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||||||||| ||||||| |||||| Sbjct 192091 TTGCCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || ||||| || |||||||| || || | | ||| | || || Sbjct 191171 GAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTATAGTCCGAAAGAGTACGGCCGTC 191230 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||||| |||||||| || | |||||||| | || ||| || ||||| || Sbjct 191231 CTCAAGCTGCTTCCCAGCGAAGATGAGACGTTGCTGGTCGGGCGGGATACCCTCCTTATC 191290 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || ||||| | || | |||| ||| ||| || || | || || || Sbjct 191291 TTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAACGTGATGGT 191350 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||||||||||| |||||| Sbjct 191351 CTTCCCGGTAAGCGTCTTCACGAAGATCTGCAT 191383 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 |||||||| || ||||| ||||||||||||||||| | | || || || || || | Sbjct 190950 AGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCGTCCTCCAAC 191009 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 ||||| |||||||| || | ||||||||| | | || || ||||| || || ||| Sbjct 191010 TGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATT 191069 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || ||||| | || | |||| || ||| || |||||||| || || || || Sbjct 191070 TTCGCCTTGACGTTGTCAATCGTGTCGGACGACTCGACCTCAAGAGTGATCGTCTTCCCG 191129 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || | |||||||| || | |||||| Sbjct 191130 GTCAACGTCTTCACAAAAATCTGCAT 191155 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || ||||| || || || ||||| |||| | || | || || Sbjct 191399 GAGGACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGACAGCGTCCGGCCGTC 191458 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | ||||||||||||||| || | |||||| || | | ||| || ||||| || Sbjct 191459 TTCCAACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATC 191518 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || ||| ||||| | || | | | || || ||| || || || || || || Sbjct 191519 CTGGATCTTTGCCTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCCAGCGTTATGGT 191578 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||| | ||||| Sbjct 191579 CTTTCCCGTGAGCGTCTTGACGAATATTTGCAT 191611 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 |||||||| || ||||| || ||||||||||| || | | || | || ||||| | Sbjct 191689 AGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCAAC 191748 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 || || || || || || | |||||| || | | ||| || ||||| || || || Sbjct 191749 TGCTTGCCCGCAAAAATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATC 191808 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || || | || | |||| || ||| ||||| || || || || |||||| Sbjct 191809 TTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCC 191868 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||||| ||||| Sbjct 191869 GTGAGAGTCTTGACGAAGATTTGCAT 191894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153788601909438