Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq117 188 1e-42 seq1836 187 5e-42 seq1 113 9e-20 seq679 102 2e-16 seq1666 93.3 9e-14 >seq117 Length=384797 Score = 188 bits (208), Expect = 1e-42 Identities = 169/211 (80%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 282890 TACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 ||||| |||| | ||||| || || |||||||||||||| | |||||||| ||||||| Sbjct 362035 TACCAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCT 362094 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTT 283008 | || || || || |||||||||| |||||| |||||| ||||||||||||||||||| Sbjct 362095 CGAGCTGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTT 362154 Query 283009 GGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCT 283068 | |||||||| || || | ||||| ||||| |||| || || || || || || |||| Sbjct 362155 GAATCTTTGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCT 362214 Query 283069 TACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| | |||||| ||||| |||||||| Sbjct 362215 TGCCCGTAAGAGTCTTCACGAAGATCTGCAT 362245 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | |||||| || || |||||||| || || | Sbjct 361458 ACCGCCACGGAGACGCAGCACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGA 361517 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| | || || || || ||||||| || || |||||| ||| Sbjct 361518 AAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGG 361577 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| || || ||| | ||||| |||||||| | || || Sbjct 361578 AATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAAC 361637 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||||||||||||||| || ||||| ||||| ||||| ||||||||| Sbjct 361638 CTCGAGAGTGATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCATT 361686 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| || || || ||||||||||||| || || || || || || || || ||||| Sbjct 361767 GTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTCGAGCTGCTTCCCA 361826 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 || ||||| | || || ||||| || || ||||||||||| |||||||| || || Sbjct 361827 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTG 361886 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 ||| | ||||| |||||||||| || || ||||| ||||| ||||| || ||||| ||| Sbjct 361887 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCCCGGTCAACGTC 361946 Query 283083 TTAACGAATATCTGCAT 283099 || ||||| |||||||| Sbjct 361947 TTGACGAAGATCTGCAT 361963 Score = 149 bits (164), Expect = 1e-30 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 282889 GTACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 |||||| | || | |||||| || || |||||||||||||| | || || || |||||| Sbjct 362312 GTACCAAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCC 362371 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || || || || || ||||| | || || || || |||||||||||||| || Sbjct 362372 TCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCC 362431 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 |||||||| || |||||| | ||||| |||||||||| || || ||||| || || ||| Sbjct 362432 TGGATCTTGGCCTTTACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTC 362491 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || | ||||| || || |||||||| Sbjct 362492 TTCCCAGTGAGGGTCTTGACAAAGATCTGCAT 362523 >seq1836 Length=575610 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| |||||||| || || || | ||| || || ||||||||||| || | Sbjct 191895 ACCGCCACGGAGGCGAAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 191954 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || |||||||| || || ||||| || Sbjct 191955 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGG 192014 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || ||| | || || ||||| || | ||||| Sbjct 192015 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGAC 192074 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||||||||| ||||| | |||||||||||| |||||||| Sbjct 192075 TTCGAGCGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || ||||| | ||| || || |||||||| ||||| | | Sbjct 191157 CCTCCACGAAGACGGAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTATAGTCCGAA 191216 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || ||||| || ||||| | |||||| ||||| ||| Sbjct 191217 AGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGTTGCTGGTCGGGCGGG 191276 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| ||||||||||| || || ||| | ||||| |||||||||| ||||| Sbjct 191277 ATACCCTCCTTATCTTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 191336 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 191337 TCCAACGTGATGGTCTTCCCGGTAAGCGTCTTCACGAAGATCTGCAT 191383 Score = 159 bits (176), Expect = 7e-34 Identities = 165/215 (77%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 282886 GAAGTACC-AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 || ||||| ||||| | ||| || |||||||||||||| || | |||||| | ||| Sbjct 190941 GACGTACCGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCG 191000 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| | || ||||| || ||||| | ||| || ||||| ||||||||||||||| Sbjct 191001 TCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTG 191060 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || ||||| || || || ||| | || || ||||| || | ||||| || ||||||||| Sbjct 191061 TCCTGGATTTTCGCCTTGACGTTGTCAATCGTGTCGGACGACTCGACCTCAAGAGTGATC 191120 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || ||||| ||||| || || |||||||| Sbjct 191121 GTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 191155 Score = 150 bits (166), Expect = 4e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||||| ||||||||||| || || | || || || ||||| Sbjct 191704 TCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCAACTGCTTGCCCGCAAAA 191763 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| || || || || || || ||||||||||| |||||||| || || ||| | Sbjct 191764 ATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 191823 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | ||||||||||| ||||||||||| ||||| | |||||| ||| Sbjct 191824 TCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCCGTGAGAGTCTTGACG 191883 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 191884 AAGATTTGCAT 191894 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||| || || || || || | || || || || || |||||||| | Sbjct 191384 ACCACCGCGCAACCGGAGGACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGA 191443 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||| || || | ||||||||||| ||||| | || || || || || Sbjct 191444 CAGCGTCCGGCCGTCTTCCAACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAGG 191503 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || ||||||||||| || ||| | ||||| || || || | || || Sbjct 191504 GATGCCCTCCTTATCCTGGATCTTTGCCTTGACGTTGTCGATGGTATCGGAGGACTCAAC 191563 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| ||||| | ||||| |||||||| ||||| Sbjct 191564 CTCCAGCGTTATGGTCTTTCCCGTGAGCGTCTTGACGAATATTTGCAT 191611 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||| ||||||||||| ||||| || | ||||| ||||| || | ||||| || Sbjct 192302 CCCTCCTTATCTTGGATCTTGGCTTTCACATTGTCGATCGTGTCAGAGGACTCGACCTCA 192361 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || ||||| ||||| || || | ||||| ||||| |||||||| || Sbjct 192362 AGCGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCATGTT 192408 >seq1 Length=925270 Score = 113 bits (124), Expect = 9e-20 Identities = 130/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 230212 TTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAG 230271 |||||||| | || ||||||||||| || |||||| | || || ||||||||||| | Sbjct 580893 TTCCTTGCGGCCTCATCGGCATGAACGCGACGCTCATGTGCCAGTACATCGAATTCGTCG 580952 Query 230272 CTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCG 230331 |||| || | | || ||||| || | ||| ||||| ||| | ||||||||||| Sbjct 580953 CTGACCGGCTCCTTGTCGCGCTCGGCGGCTCGAAGGTGTACAACGTGACGAACCCCTTCG 581012 Query 230332 CTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGT 230386 || ||||| | || || |||||||| || || ||||||||||| ||||| || Sbjct 581013 ACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGT 581067 Score = 96.9 bits (106), Expect = 7e-15 Identities = 128/178 (72%), Gaps = 5/178 (3%) Strand=Plus/Minus Query 230214 CCTTGCCGT-----CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCG 230268 ||||||||| || || |||||||| || | |||||| | || || |||||||||| Sbjct 578175 CCTTGCCGTGCGCGCTGATTGGCATGAACGCGCAGCTCATGCGCCAGTACATCGAATTCG 578116 Query 230269 TAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCT 230328 | || || | | | || |||| || |||||||| || || | | ||| || | Sbjct 578115 TCGCCGACAGGCTGCTGGTTTCGCTGGGCAACGAGAAACACTACCACGCAACGAATCCGT 578056 Query 230329 TCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGT 230386 ||| ||| ||||| | || || |||||||| || || ||||||||||| |||||||| Sbjct 578055 TCGATTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGT 577998 >seq679 Length=256444 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || |||||| | ||||| ||||| |||| || || || Sbjct 229369 CCCTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTGTCAGAAGACTCCACCTCA 229428 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 229429 AGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 229472 >seq1666 Length=152845 Score = 93.3 bits (102), Expect = 9e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| |||| ||| || || ||||||||||||||| Sbjct 77709 ACCACCACGCAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCACT 77768 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || ||||| || ||||| || || || ||||| |||||||| || |||||||| Sbjct 77769 GAGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTC 77822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046709990088412