Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq117 152 4e-32 seq1836 149 5e-31 >seq117 Length=384797 Score = 152 bits (168), Expect = 4e-32 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 |||||||||||||||||||| ||||||||||| |||| |||| || | || || ||| Sbjct 362318 AGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTCAAGC 362377 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || ||||| | ||||||||||| | || | ||| ||||| ||| ||| Sbjct 362378 TGCTTACCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGATC 362437 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || ||| | | | |||||||| | || |||||||| | |||||| ||||| || Sbjct 362438 TTGGCCTTTACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTCTTCCCA 362497 Query 44312 GTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||||| || ||||| |||||| Sbjct 362498 GTGAGGGTCTTGACAAAGATCTGCATG 362524 Score = 136 bits (150), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || || ||||||||||| ||||||||||| |||| ||| ||| | || || ||| Sbjct 362040 AGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCGAGC 362099 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || |||||||||| ||| ||||| || | || | ||| ||||| || ||| Sbjct 362100 TGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTGAATC 362159 Query 44252 TTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 || ||| || ||| | |||||||| | || || ||||| | ||||| ||||| | Sbjct 362160 TTTGCCTTGACATTGT--CGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCTTGC 362217 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||||||||||||| ||||| Sbjct 362218 CCGTAAGAGTCTTCACGAAGATCTGCAT 362245 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||| ||||| |||||||||||||| |||||||| ||||| | || || |||| Sbjct 361473 CAGCACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTACGGCCGTC 361532 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||| |||||| || || ||||||| |||||||| || | || | || ||||| || Sbjct 361533 CTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCCTCCTTGTC 361592 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | |||||| ||| | | | |||||||| | || || ||||| | || ||||| Sbjct 361593 CTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGAGTGATCGT 361652 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| |||||||| ||||| Sbjct 361653 CTTCCCGGTCAACGTCTTGACGAAGATCTGCAT 361685 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || ||||||||||| || |||||||| || | || ||| |||| || ||| Sbjct 361758 AGGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTCGAGC 361817 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 |||||||| || ||||| | |||||||| |||| ||| | || ||||| ||| ||| Sbjct 361818 TGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGATC 361877 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||| | | | |||||||| | || |||||||| | || || ||||| || Sbjct 361878 TTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCCCG 361937 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| |||||||| ||||| Sbjct 361938 GTCAACGTCTTGACGAAGATCTGCAT 361963 >seq1836 Length=575610 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| ||| |||||| |||||||||||||||| || ||| | || || Sbjct 191913 CACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCCTC 191972 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || |||||||| |||||||| || | ||| | || ||||| ||| Sbjct 191973 GAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 192032 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | || ||||||| || || || || | ||| |||||||| Sbjct 192033 GATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTT 192092 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| ||||| |||||||| ||||| Sbjct 192093 GCCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 138 bits (152), Expect = 8e-28 Identities = 158/211 (75%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| || ||||| || |||||| ||||||||||| || | || ||| |||| | Sbjct 191684 CACCGAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTT 191743 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||| |||| ||||||||||| | ||| | || ||||| ||| Sbjct 191744 CCAACTGCTTGCCCGCAAAAATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCT 191803 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||||| | | || ||||||| || || || || | ||| ||||||| Sbjct 191804 GGATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCT 191863 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||| ||||| |||||||||||||| Sbjct 191864 TGCCCGTGAGAGTCTTGACGAAGATTTGCAT 191894 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| || || ||||| |||| || || |||| ||| Sbjct 191403 ACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGACAGCGTCCGGCCGTCTTCC 191462 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||| |||||||| ||||| | ||||||||||| | ||| | || ||||| ||| Sbjct 191463 AACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCCTGG 191522 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | ||| | ||||| |||| ||| || ||||||| ||| || ||||| Sbjct 191523 ATCTT-TGCCTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCCAGCGTTATGGTCTT 191581 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||| ||||| ||||| ||||||||| Sbjct 191582 TCCCGTGAGCGTCTTGACGAATATTTGCATG 191612 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || ||||| ||| ||||||||||||||||||||| | || | |||| |||| | Sbjct 190950 AGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCGTCCTCCAAC 191009 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 |||||||| || ||||| | ||||||||| |||| || | ||| ||||| ||| || Sbjct 191010 TGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATT 191069 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||| | | | || ||||||| || || ||||| | || |||||||| || Sbjct 191070 TTCGCCTTGACGTTGTCAATCGTGTCGGACGACTCGACCTCAAGAGTGATCGTCTTCCCG 191129 Query 44312 GTGAGGGTCTTCACGAAGATTTGCATG 44338 || | |||||||| || || |||||| Sbjct 191130 GTCAACGTCTTCACAAAAATCTGCATG 191156 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || ||||| |||||| |||||||| || || | || || |||| || Sbjct 191175 ACGAGATGCAGCGTCGACTCCTTCTGGATGTTATAGTCCGAAAGAGTACGGCCGTCCTCA 191234 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||||||||| || ||||| | ||| ||||| || | || | ||| ||||| || Sbjct 191235 AGCTGCTTCCCAGCGAAGATGAGACGTTGCTGGTCGGGCGGGATACCCTCCTTATCTTGG 191294 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||| | || || ||||||| ||| || ||||| Sbjct 191295 ATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAACGTGATGGTCTTC 191354 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||||||||||||| ||||| Sbjct 191355 CCGGTAAGCGTCTTCACGAAGATCTGCAT 191383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359980844279826