Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq13613 100 6e-16 seq13655 93.3 9e-14 seq13619 91.5 3e-13 >seq13613 Length=18521 Score = 100 bits (110), Expect = 6e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | || |||||||| || ||||| ||| | | ||||||| || || | ||||| Sbjct 17033 ATGTGCCAATACATCGAGTTTGTAGCGGACAGGCTGCTTGTTGCTCTCGGAAATGAGAAG 16974 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 |||||||| || ||||| |||| || ||||| | ||||||||| | ||||||||| Sbjct 16973 CACTACAACTCAAATAACCCGTTTGACTTCATGGACATGATTTCGCTTGAGGGGAAGACC 16914 Query 230590 AACTTCTTCGAAAAGCGTGT 230609 ||||||||||| || || || Sbjct 16913 AACTTCTTCGAGAAACGGGT 16894 >seq13655 Length=683 Score = 93.3 bits (102), Expect = 9e-14 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||| | | || ||| | || |||||||| ||||| ||||| || | Sbjct 9 CTCATCGGCATGAACTCYAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGATCGTCTA 68 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || ||||| | || || ||| | | |||||||| | || ||||| Sbjct 69 CTCGTCGCGCTTGGCGATGACAAGCACTACGGCGTCACCAACCCCTTCGACTTCATGGAC 128 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 | || ||||| || || ||||||||||||||||| ||||| ||| ||||| || | Sbjct 129 ATGATCTCGCTCCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTCTCGGACTACTCGAAG 188 Query 230626 CCTGGTGTGA 230635 ||||||||| Sbjct 189 GCTGGTGTGA 198 >seq13619 Length=8937 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||| | | || ||| | || |||||||| ||||| ||||| || | Sbjct 833 CTCATCGGCATGAACTCCAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGATCGTCTA 892 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || ||||| | || || ||| | | |||||||| | || ||||| Sbjct 893 CTCGTCGCGCTTGGCGATGACAAGCACTACGGCGTCACCAACCCCTTCGACTTCATGGAC 952 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 | || ||||| || || ||||||||||||||||| ||||| ||| ||||| || | Sbjct 953 ATGATCTCGCTCCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTCTCGGACTACTCGAAG 1012 Query 230626 CCTGGTGTGA 230635 ||||||||| Sbjct 1013 GCTGGTGTGA 1022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057567800646890