Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq17681 131 2e-25 >seq17681 Length=5155 Score = 131 bits (144), Expect = 2e-25 Identities = 237/344 (69%), Gaps = 2/344 (1%) Strand=Plus/Minus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCT-CTTGATCTCCCC 145982 || |||||||| || |||||| || | | | ||| ||| || | |||||||| | Sbjct 3357 GCGGGGTTCCAAGCACTGAGGATGATGCGACGG-TCTGTGGGGTCGTGCTTGATCTTGCG 3299 Query 145983 TATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTA 146042 || ||| ||||| || ||||||| || ||| |||| | | ||||| |||| Sbjct 3298 GATGCACTCCTGAAGCTGATCGACGCCCTTTCCAGAGTAGTCTGCGTCGCAGTCCTCGTA 3239 Query 146043 CGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCT 146102 | || ||||| || | ||| ||||| ||||||||||| || ||||| || | Sbjct 3238 CTTTGCTCCGAAATGGCGCCATTGGAAACCGTAGACGGGGCCAAGGTCACCTTCGCGTCG 3179 Query 146103 GTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGAC 146162 || || || ||| | ||||||| ||| ||| |||||| ||||||||||||||| Sbjct 3178 ATGACCGAGGCCGCGCTTCTCGAGGAACTCCTTGGAGCCGTTGCCGTCCCAGATCTTGAT 3119 Query 146163 GCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222 |||| | ||||||| |||||||| ||||| || | || |||||||| ||||| || Sbjct 3118 GCCCTTTTCGGAGAGGAGCTTGGAGTCTGTGGAACCGCGTATAAACCAGAGAAGCTCCTC 3059 Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || || || | ||| || |||||||| || || |||| Sbjct 3058 GACGATGCCGCGTAGAAAGGTTCTTTTGGTGGTGAGAAGAGGGA 3015 Score = 123 bits (136), Expect = 3e-23 Identities = 224/320 (70%), Gaps = 12/320 (4%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||||| |||| || ||||| | |||||||| | | | |||||| ||| | Sbjct 3835 CATCTTCATGGCGATGCTCGGATGGGGATTATAGCCCTCGACGACGATGTCCTCGGCCGT 3776 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCT-GGGAAAGGGCCGGGGGC 145663 ||| | || ||| || || |||| |||||| | ||||| |||| ||||| Sbjct 3775 GAACCCGTCGATGCTGTCGACGGACCTCGCCCACCTGAGTTTCGGGAACGGGC--GGGGC 3718 Query 145664 TCCTGGTC-AGCTGGA-GCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCC 145721 || | || ||||||| || | |||| || | ||||| | |||| || || |||||||| Sbjct 3717 TCGCGCTCGAGCTGGATGCGT-AGGGCGTCGATGTGGTCGCGGTACACATGGGCGTCCCC 3659 Query 145722 CAGGACGTGGATGAAGTCCCCG---GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778 || ||||||| | | || || ||| ||| |||| ||||||||||||| || Sbjct 3658 GAGC---TGGATGATGAGCTCGTGAGGATCGGTGCCGGTGACATGGGCGACCATGTGTGT 3602 Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838 || |||| |||| ||| ||||||||||| | || || || | ||| | || ||||| Sbjct 3601 GAGGAGGGCGTAGGAGGCGATGTTGAAGGGGATGCCGAGACCAAGGTCGGCGGAACGCTG 3542 Query 145839 GTACAGCTGGCAGGAGAGCT 145858 ||||| | |||||||||| Sbjct 3541 GTACATGAGACAGGAGAGCT 3522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589937372228120