Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq13613 327 1e-84 seq13619 320 2e-82 seq13643 163 3e-35 seq10137 127 2e-24 seq6477 118 1e-21 seq17864 86.0 6e-12 seq15381 82.4 8e-11 >seq13613 Length=18521 Score = 327 bits (362), Expect = 1e-84 Identities = 419/574 (73%), Gaps = 5/574 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||| |||| ||||||| |||||||| ||||| ||| | || || Sbjct 17780 ATATGGCAAATGTACAAACGGGCCCAGGCGTCATTCTGGACAGTCGAAGAGATTGATCTT 17721 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACG---ACAACGAGCGCCATTTCATCAAG 116752 || | ||| ||||||| | | | | |||||||||| || ||| || Sbjct 17720 TCGCATGACCTTTTCGACTGGAACGGGAAGCTCACAAACAACGAGCGGCACTTCCTCTCT 17661 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | ||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct 17660 TATGTGCTCGCCTTCTTCGCCGCCTCAGACGGCATTGTCAACGAGAATCTGGTCGAGCGG 17601 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || || | ||||| |||| || ||||| || ||||| ||||||||||||||| || Sbjct 17600 TTTTCTAACGAGGTCCAGGCCGCTGAGGCACGATGCTTTTACGGCTTTCAGATCATGATC 17541 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 || ||||| |||||||| | || || ||||||||| || || | | | | || Sbjct 17540 GAAAACGTTCACTCGGAGACCTACTCTCTCCTCATCGATACTTATATCAGAGATCCCGAC 17481 Query 116933 GAGAAGCTCCGTT-TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGA 116991 || | | || | | || |||| ||||| || || || || |||| |||||||||| Sbjct 17480 GA-ACGGACCTTCCTCTTCGACGCAATCGAAACCATACCCTGTATCAAGAAGAAGGCCGA 17422 Query 116992 GTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTT 117051 ||||| |||| ||||| || | | || ||| |||| ||||| |||||||| || Sbjct 17421 CTGGGCATTGCGTTGGATAGCGGACGACCAGTCCGTGTTCGCTGAGCGACTGGTGGCGTT 17362 Query 117052 CGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAA 117111 |||||||| |||||| | ||||| || || |||| ||| |||| || ||||||||||| Sbjct 17361 TGCGGCCGTGGAGGGCATATTCTTCTCTGGGTGTTTTGCCTCCATCTTCTGGCTCAAGAA 17302 Query 117112 ACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCT 117171 || || ||||||||||||||||| ||| ||||||||||| || | |||||||| | Sbjct 17301 GCGTGGGCTCATGCCCGGCCTGACGTTCTCAAACGAGCTCATATCGCGCGACGAGGGCAT 17242 Query 117172 GCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 |||| |||||| || || | |||||| | ||| Sbjct 17241 GCATACCGACTTCGCTTGCCTCCTGTTCCACCAT 17208 >seq13619 Length=8937 Score = 320 bits (354), Expect = 2e-82 Identities = 417/572 (73%), Gaps = 11/572 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || || ||||||| |||||| |||| || Sbjct 109 ATTTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTTTGGACCGCGGAGGAGATGGATCTT 168 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||| ||| | || | |||||| | |||||||| |||||| Sbjct 169 TCCAAGGATCTCCA-CGATTGGCACAACCGTCTCAACGACGATGAGCGCCACTTCATCTC 227 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 || || || ||||| ||||||||| || || || || |||||||| || ||||| || Sbjct 228 TCATGTCCTCGCCTTCTTCGCCGCCTCAGATGGTATTGTGAACGAGAACCTCGTCGAACG 287 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 |||| | | ||||| |||| || ||||| || |||||||||||||| |||||| || Sbjct 288 TTTCTCCAACGAGGTCCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 347 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTC 116928 ||||||| | ||||| |||| || || |||||||||||| ||| | | | Sbjct 348 GGAGAACATCCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCAAAGACCCCAA 407 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | || ||| || | || | || || || || || || ||| |||| ||||||| Sbjct 408 GCAGCGTGAGCACC---TCTTCGATGCAATTGAAACCATCCCCTGCATCAAGAAGAAGGC 464 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 ||| ||||| || ||||||||| | | | ||| | | |||| |||||||| || || Sbjct 465 CGACTGGGCACTCCGCTGGATCTCGGATACGGAGTCTACTTTCGCGGAGCGCCTTGTCGC 524 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 |||||| || |||||||| ||||||| || || || || | || || |||||||| Sbjct 525 CTTCGCCGCGGTCGAGGGTATCTTCTTCTCTGGGTCCTTTGCGTCAATCTTCTGGCTCAA 584 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| |||||| | |||||||| || || ||| |||||||||||||| | |||||||| Sbjct 585 GAAGCGCGGCTTGATGCCCGGTCTCACGTTCTCGAACGAGCTCATCTCGCGTGACGAGGG 644 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 | |||| |||||| || || ||||| |||| Sbjct 645 TATGCACACCGACTTCGCATGCTTGCTCTTCA 676 >seq13643 Length=1514 Score = 163 bits (180), Expect = 3e-35 Identities = 211/287 (74%), Gaps = 7/287 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||| ||| |||| || |||||||| ||||| ||| | || || Sbjct 355 ATATGGCAAATGTACAAACGAGCCCAGGCCTCATTCTGGACAGTCGAAGAGATTGATCTC 296 Query 116696 TCCAAGGACA----CGAGCG-ACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCA 116750 || | ||| ||| | | ||||| ||| | |||||||||| || ||| || Sbjct 295 TCGCATGACCTTTTCGATTGGAATGGGAA-GCTCACAA-ACAACGAGCGGCACTTCCTCT 238 Query 116751 AGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC 116810 | ||||| ||||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct 237 CTTATGTGCTCGCCTTCTTCGCCGCCTCAGACGGCATTGTCAACGAGAATCTGGTCGAGC 178 Query 116811 GTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 | || || | ||||| |||| || ||||| || ||||| |||||||| |||||| | Sbjct 177 GGTTTTCTAACGAGGTCCAGGCCGCTGAGGCACGATGCTTTTACGGCTTCCAGATCATGA 118 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 | || ||||| ||||| || | || || |||||||||||| ||| Sbjct 117 TCGAAAACGTCCACTCCGAGACATACTCTCTCCTCATCGACACTTAC 71 >seq10137 Length=11321 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || |||||| | || ||||| | | Sbjct 2928 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCTTGGAGGTCGAGTCGTCG 2869 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| ||||| || || | |||||| Sbjct 2868 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATTCCGCCCGACCAG 2809 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||||||||| ||||| || || | |||||| ||| || |||||| Sbjct 2808 CAGCGTCTCATCTTCGCGGGCAAGCAGCTTGAGGATGGGCGCACGCTCTCTGATTACAAC 2749 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| ||| || || || ||| Sbjct 2748 ATCCAGAAGGAGAGCACCCTCCACCTTGTG 2719 Score = 125 bits (138), Expect = 7e-24 Identities = 150/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| |||| || || || || Sbjct 3504 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTCC 3445 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| ||||||||||| | ||||| Sbjct 3444 GACACCATCGACAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 3386 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || |||||||| |||| || || || |||||||| Sbjct 3385 GCAGCGTCTTATCTTTGCCGGTAAGCAGCTGGAGGACGGCCGTACTCTTTCGGACTACAA 3326 Query 40869 CATCCAGAAGGAGGCCACGCT 40889 |||||||||||| |||| || Sbjct 3325 TATCCAGAAGGAGTCCACTCT 3305 Score = 113 bits (124), Expect = 5e-20 Identities = 153/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAA---CCATCACCGTCGACGTCGAAGCC 40746 ||||| || || || || ||| | ||||| || | | |||||| |||| || || | Sbjct 3218 ATGCAGATCTTTGTCAAGACGTTGACGGGTAAGAAGACTATCACCCTCGAGGTGGAGTCT 3159 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | |||| |||||| || |||| ||||| ||||| |||||| | || Sbjct 3158 TCGGACACGATCGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGA 3100 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || | |||| ||| || || ||||| || || | |||||||| |||||| Sbjct 3099 CCAGCAGCGCTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGTCGCACCCTGTCCGACTA 3040 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||| ||||||||| |||||| ||||| Sbjct 3039 CAACATTCAGAAGGAGAGCACGCTTCATCT 3010 >seq6477 Length=89905 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||| | || || || || ||||| |||| ||||| | | Sbjct 6932 ATGCAAATCTTCGTGAAGACGTTGACCGGAAAGACGATCACTCTCGAGGTCGAGTCTTCG 6991 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || |||| ||||| ||||| ||||| | ||||| Sbjct 6992 GACACTATCGACAACGTT-AAGGCGAAGATTCAAGACAAGGAGGGGATCCCTCCCGACCA 7050 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | |||||| | |||||| || Sbjct 7051 GCAGCGTCTCATCTTCGCCGGGAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTATAA 7110 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| |||| || || || Sbjct 7111 CATCCAGAAGGAGTCCACCCTTCACCT 7137 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || |||||||| || || ||||| | || || || || | Sbjct 7441 ATGCAAATTTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCCTCG 7500 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || |||| ||||| ||||| || || | || ||| Sbjct 7501 GACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGGATTCCGCCTGATCAG 7560 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||| |||| |||| ||| || ||| |||||||||| Sbjct 7561 CAGCGCCTGATCTTCGCTGGGAAGCAGTTGGAGGACGGGCGTACGCTCTCCGACTACAAC 7620 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| ||| || || || Sbjct 7621 ATCCAGAAGGAGAGCACACTCCACCT 7646 Score = 109 bits (120), Expect = 6e-19 Identities = 142/193 (74%), Gaps = 10/193 (5%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || |||||| |||| || || | || Sbjct 6718 ATGCAGATCTTCGTCAAGACCCTCACGGG-AAGACTATCACCCTCGAGGTGGAGTCGTCC 6776 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||||||| ||||| ||||||||||| | ||||| Sbjct 6777 GACACTATCGATAACG-TCAAGGCGAAAATTCAGGACAAGGAGGGCATCCCGCCTGACCA 6835 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || | ||| || |||| ||||| ||| ||||||||| Sbjct 6836 GCAGCGTCTTATCTTTGC-------CGGCTCGAGGACGGTCGCACTCTCTCCGACTACAA 6888 Query 40869 CATCCAGAAGGAG 40881 ||| ||||||||| Sbjct 6889 CATTCAGAAGGAG 6901 >seq17864 Length=12555 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 40765 CTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTAC 40824 ||||| || ||| | ||||| ||||| ||||| | ||||||||||| | |||| Sbjct 12360 CTCAAATTAAGAATCCAGGACAAGGAGGGAATCCCGCCCGACCAGCAACGGTTTATCTTT 12419 Query 40825 GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCC 40884 || || || ||||| || |||| ||||| ||| ||||||||||||| || |||| | Sbjct 12420 GCTGGAAAGCAGCTCGAAGACGGCCGCACTCTCCGCGACTACAACATCGGGAGGGAGTGC 12479 Query 40885 ACGCTGCATCTAGTGTTGCG 40904 || || || || ||| |||| Sbjct 12480 ACACTCCACCTTGTGCTGCG 12499 >seq15381 Length=32578 Score = 82.4 bits (90), Expect = 8e-11 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 116759 CTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC-GC 116817 || || |||||||| || || || |||||||||||||| ||||| ||||| ||| || Sbjct 23078 CTCGCGTTTTTCGCGGCGTCTGATGGAATCGTCAACGAGAACCTGGTAGAGCGGTTCTGC 23019 Query 116818 TCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 || | ||||||| | | ||||| |||||||||||||| || || ||| Sbjct 23018 TCCG-AGGTGCAAATCCCAGAGGCACGGTGCTTCTACGGGTTCCAAATC 22971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515097460143280