Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq6477 131 1e-25 seq10137 122 8e-23 >seq6477 Length=89905 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||| || ||| || ||||| |||||| ||||| || || Sbjct 7128 GTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGCTGCTTCCCG 7069 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||||||||||||||| |||||||| || |||||||||||| ||| || ||| Sbjct 7068 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATCTTCGCCTTA 7009 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||||| ||||||||||| || | ||| || ||||||| || Sbjct 7008 ACGTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGTCAACGTC 6949 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 6948 TTCACGAAGATTTGCAT 6932 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | | ||| || | ||| | || ||||| || |||||||||||||| Sbjct 7439 CCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAA 7380 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || |||||| | ||| || ||||| |||| || || || || || || || Sbjct 7379 AGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGA 7320 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| ||| || || || | |||| ||| |||| ||| ||| Sbjct 7319 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACC 7260 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | |||||||||||| || || || || ||||||||||| Sbjct 7259 TCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| ||| || || |||||||| ||| | || ||| ||||| | ||| Sbjct 7644 GTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTG 7585 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||| || ||||||||||| || || || ||||||||||| ||| || Sbjct 7584 CTTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATCTT 7525 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| | ||| ||||| | || | ||| || || || Sbjct 7524 GGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGT 7465 Query 118715 CAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || |||||||| |||||| || Sbjct 7464 GAGGGTCTTCACAAAAATTTGCATGCCT 7437 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||| | |||||| ||||||||| | || | Sbjct 6901 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCCG-------GCAAA 6849 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| ||||||||||| || || || |||||||||||||| |||||| || || | Sbjct 6848 GATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTTTCGCCTTGACGTT 6789 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | ||| ||||||| ||| | || || || || || || || || Sbjct 6788 ATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTT-CCCGTGAGGGTCTTGAC 6730 Query 118727 AAAAATCTGCATGGCT 118742 || ||||||||| || Sbjct 6729 GAAGATCTGCATGCCT 6714 >seq10137 Length=11321 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||| || || ||||||||||| | |||||| |||||| Sbjct 2719 CACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTC 2778 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||||||||||||||| ||||| || || ||||||||||| Sbjct 2779 AAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTG 2838 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| ||||||||| | ||| | ||| || Sbjct 2839 GATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTT 2898 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || ||||||||||| Sbjct 2899 CCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||| ||| || ||||| || || || ||||| || | ||| || ||||| Sbjct 3296 ACCAAGGGGAGAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCC 3355 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| ||||||||||| |||||||| |||||||||||||| Sbjct 3356 AGCTGCTTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 3415 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | | ||| ||||||| ||| | || ||| Sbjct 3416 ATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTG 3475 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || || || |||||||| Sbjct 3476 CCGGTCAAGGTCTTCACGAAGATCTGCAT 3504 Score = 102 bits (112), Expect = 7e-17 Identities = 140/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||| || ||||| |||||||||||| || |||||| | Sbjct 3024 CTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGCTGCTTACCAGCGAA 3083 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| | |||||||| || || || || ||||||||||| ||| || || || | Sbjct 3084 GATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 3143 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCA---CCGTTTTGCCGGTCAGAGTTTT 118723 |||| ||||||| ||| ||||||| ||| | | | || || |||| || || Sbjct 3144 GTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTTACCCGTCAACGTCTT 3203 Query 118724 TACAAAAATCTGCAT 118738 ||||| |||||||| Sbjct 3204 GACAAAGATCTGCAT 3218 Score = 86.0 bits (94), Expect = 5e-12 Identities = 81/102 (79%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||||||||| || | |||||| ||||||||||| Sbjct 3582 GTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGCCCGTCCTCGAGCTG 3641 Query 118595 TTTTCCAGCGTAGATGAGAC-GCTGCTGATCGGGAGGTATGC 118635 || |||||| ||||||||| ||||||| |||||||| |||| Sbjct 3642 CTTCCCAGCGAAGATGAGACGGCTGCTGGTCGGGAGGGATGC 3683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433730454016876