Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq6477 120 2e-22 seq10137 114 8e-21 >seq6477 Length=89905 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | || || || ||||| |||||||||||||| ||| ||| |||| |||||| Sbjct 7646 AGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAAC 7587 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 ||||| || ||||| || || |||||||| || || | | ||||||||| ||| Sbjct 7586 TGCTTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATC 7527 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | || | | |||| || | || || || |||| |||||| || || || Sbjct 7526 TTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCC 7467 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || |||||||| || ||||| Sbjct 7466 GTGAGGGTCTTCACAAAAATTTGCAT 7441 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || || ||||| | || || ||||| |||||||| || || Sbjct 7439 CCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAA 7380 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || ||||||||||| || || || || || || || ||||| || Sbjct 7379 AGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGA 7320 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | ||| | || || || Sbjct 7319 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACC 7260 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| ||||||||||| || || ||||| || |||||||| Sbjct 7259 TCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 || ||||| ||||| |||||||||| | || || | || || | |||||| || ||||| Sbjct 7122 TCCTTCTGGATGTTATAGTCGGACAAGGTG-CGACCATCCTCAAGCTGCTTCCCGGCGAA 7064 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| |||||||||||| || | | ||||||||| ||||| ||| | | Sbjct 7063 GATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATCTTCGCCTTAACGTT 7004 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || ||||| || | ||||| || || ||||| | || ||||| Sbjct 7003 GTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGTCAACGTCTTCAC 6944 Query 34378 AAAGATCTGCAT 34389 ||||| ||||| Sbjct 6943 GAAGATTTGCAT 6932 >seq10137 Length=11321 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | || || || ||||| |||||||| || || ||| || | || Sbjct 2717 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCC 2776 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| |||||||||||| || | | ||||||||| Sbjct 2777 TCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCC 2836 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | ||| ||||| |||| ||||| || Sbjct 2837 TGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTC 2896 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || ||||| || || || || ||||||||| Sbjct 2897 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 2929 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || |||||||| || || |||| |||| |||| |||||| || || || Sbjct 3314 TCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTACCGGCAAAG 3373 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | || ||||||||| ||||| ||| | | | Sbjct 3374 ATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 3433 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| || || || || | |||||||| |||||||| | || ||||| Sbjct 3434 TCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACG 3493 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 3494 AAGATCTGCAT 3504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322997570571680