Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq13613 131 2e-25 >seq13613 Length=18521 Score = 131 bits (144), Expect = 2e-25 Identities = 291/436 (67%), Gaps = 3/436 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| ||| |||| |||||||| | || | ||||| || ||||| || Sbjct 17224 CAAGCGAAGTCGGTATGCATGCCCTCGTCGCGCGATATGAGCTCGTTTGAGAACGTCAGG 17283 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || ||||| || || | || || ||||| Sbjct 17284 CCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAACACCCAGAGAAGAAT 17343 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG---T 33758 || || || || || ||||| || | |||| ||| | | ||| ||| | | Sbjct 17344 ATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAACACGGACTGGTCGTCCGCT 17403 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| ||||| ||||||||||| || | ||| || || ||||| || || | Sbjct 17404 ATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGGGTATGGTTTCGATTGCGTCG 17463 Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878 ||||| || | ||| | |||| | | |||||||||||| | ||| || | Sbjct 17464 AAGAGGAAGGTCCGTTCGTCGGGATCTCTGATATAAGTATCGATGAGGAGAGAGTAGGTC 17523 Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938 ||||| |||| |||||| || |||||||| ||||| || |||| ||||| | | Sbjct 17524 TCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAAAGCATCGTGCCTCAGCGGCC 17583 Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998 || || || || |||| || || | | ||| || || || || || || ||| || Sbjct 17584 TGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGACAATGCCGTCTGAGGCGGCG 17643 Query 33999 AAAAACGCCAATACAT 34014 || || || | |||| Sbjct 17644 AAGAAGGCGAGCACAT 17659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629668781973840