Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq13613 167 3e-36 >seq13613 Length=18521 Score = 167 bits (184), Expect = 3e-36 Identities = 373/557 (67%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| |||| |||||||| | || || ||||| || ||||| || Sbjct 17224 CAAGCGAAGTCGGTATGCATGCCCTCGTCGCGCGATATGAGCTCGTTTGAGAACGTCAGG 17283 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || ||||| || ||||| ||||| ||||||| ||||| Sbjct 17284 CCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAACACCCAGAGAAGAAT 17343 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGC--GCTGTCATGT 50136 || || || || || ||||| || || |||| ||| | | || | | | ||| | Sbjct 17344 ATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAACACGGACTGGTCGTCCGCT 17403 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| ||||| ||||||||||| || | ||| || || ||||| || || | Sbjct 17404 ATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGGGTATGGTTTCGATTGCGTCG 17463 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 ||||| || | ||| | |||| | | |||||||||||| | ||| || | Sbjct 17464 AAGAGGAAGGTCCGTTCGTCGGGATCTCTGATATAAGTATCGATGAGGAGAGAGTAGGTC 17523 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 ||||| |||| |||||| || |||||||| ||||| || |||| ||||| | | Sbjct 17524 TCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAAAGCATCGTGCCTCAGCGGCC 17583 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 || || || || |||| || || | | ||| || || || || ||||| ||| || Sbjct 17584 TGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGACAATGCCGTCTGAGGCGGCG 17643 Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTT---ATTCCAA 50433 || || || | |||| | || || |||||| ||| || || ||||| Sbjct 17644 AAGAAGGCGAGCACATAAGAGAGGAAGTGCCGCTCGTTGTTTGTGAGCTTCCCGTTCCAG 17703 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 || | || | || | ||| | ||||| |||||||| ||||| |||| ||| | Sbjct 17704 TCGAAAAGGTCATGCGAAAGATCAATCTCTTCGACTGTCCAGAATGACGCCTGGGCCCGT 17763 Query 50494 TTATACATATTCCAGAT 50510 || ||||| | ||| || Sbjct 17764 TTGTACATTTGCCATAT 17780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718099082060920