Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq13613 145 1e-29 >seq13613 Length=18521 Score = 145 bits (160), Expect = 1e-29 Identities = 270/395 (68%), Gaps = 5/395 (1%) Strand=Plus/Plus Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 ||||| || ||||| || |||||||| || |||||||| || ||||| || || || ||| Sbjct 17266 TCGTTTGAGAACGTCAGGCCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCA 17325 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 42226 || | ||||| ||||| || || || || |||||||| || | |||| ||| | | Sbjct 17326 AAACACCCAGAGAAGAATATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAAC 17385 Query 42227 CCGGCACTG----TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282 ||| |||| || |||||| ||||| ||||||||||| || | ||| || Sbjct 17386 ACGG-ACTGGTCGTCCGCTATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGGG 17444 Query 42283 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 42342 || ||||| || || | ||||| || | ||| | |||| | | ||| ||||| Sbjct 17445 TATGGTTTCGATTGCGTCGAAGAGGAAGGTCCGTTCGTCGGGATCTCTGATATAAGTATC 17504 Query 42343 GATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 42402 ||| | ||| || | || || |||| |||||| || |||||||| ||||| || Sbjct 17505 GATGAGGAGAGAGTAGGTCTCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAAA 17564 Query 42403 ACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCAC 42462 |||| ||||| | |||| || || || |||| || || | | ||| ||||| || Sbjct 17565 GCATCGTGCCTCAGCGGCCTGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGAC 17624 Query 42463 TATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 42497 || ||||| ||| || || || || | |||| Sbjct 17625 AATGCCGTCTGAGGCGGCGAAGAAGGCGAGCACAT 17659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670980618196280