Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq13613 237 2e-57 seq13619 221 2e-52 seq15036 127 3e-24 seq13643 116 5e-21 seq15381 91.5 2e-13 seq13655 87.8 3e-12 >seq13613 Length=18521 Score = 237 bits (262), Expect = 2e-57 Identities = 382/543 (70%), Gaps = 12/543 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| ||||||||||| ||| ||||| || || ||||| ||||||||| | ||||| Sbjct 17780 ATATGGCAAATGTACAAACGGGCCCAGGCGTCATTCTGGACAGTCGAAGAGATTGATCTT 17721 Query 125079 TCCAAGGACCTGTACGATTGGGA---GACTCGTTTGACTGAAACTGAGCGAGAGTTTATA 125135 || | ||||| | ||| ||| | || | | || | | ||||| | || | Sbjct 17720 TCGCATGACCTTTTCGACTGGAACGGGAAGC---TCACAAACAACGAGCGGCACTTCCTC 17664 Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACA 125195 || | | | |||||||| |||| ||| || || || |||||||| |||||| | Sbjct 17663 TCTTATGTGCTCGCCTTCTTCGCCGCCTCAGACGGCATTGTCAACGAGAATCTGGTCGAG 17604 Query 125196 CGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 || || ||| | ||| | ||| || |||| ||||||||||| || || |||| Sbjct 17603 CGGTTTTCTAACGAGGT--CCAGGCCGCTGAGGCACGATGCTTTTACGGCTTTCAGATCA 17546 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC 125313 |||| || ||||| |||||||| | |||||| || || || | || || | |||| Sbjct 17545 TGATCGAAAACGTTCACTCGGAGACCTACTCTCTCCTCATCGATACTTATATCAGAGATC 17486 Query 125314 CGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 | | ||| | || | | |||| |||||||||| || | || | ||| || ||| Sbjct 17485 C-CGACGAACGGACCTTCCTCTTCGACGCAATCGAAACCATACCCTGTATCAAGAAGAAG 17427 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || | |||| | || ||||| | |||||| |||| || ||| || |||||||| Sbjct 17426 GCCGACTGGGCATTGCGTTGGATAGCGGACGACCAGTCCGTGTTCGCTGAGCGACTGGTG 17367 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || ||||| |||||||| ||||| || || ||||||| ||||||| |||||| Sbjct 17366 GCGTTTGCGGCCGTGGAGGGCATATTCTTCTCTGGGTGTTTTGCCTCCATCTTCTGGCTC 17307 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || ||||||||||| |||||| | |||||| | ||||| || |||||| Sbjct 17306 AAGAAGCGTGGGCTCATGCCCGGCCTGACGTTCTCAAACGAGCTCATATCGCGCGACGAG 17247 Query 125553 GGC 125555 ||| Sbjct 17246 GGC 17244 >seq13619 Length=8937 Score = 221 bits (244), Expect = 2e-52 Identities = 392/563 (70%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| ||||| |||| ||||||||||| | || ||| | ||||| Sbjct 109 ATTTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTTTGGACCGCGGAGGAGATGGATCTT 168 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||||||| | | ||| | | || |||||| | || || || Sbjct 169 TCCAAGGATCTCCACGATTGGCACAACCGTCTCAACGACGATGAGCGCCACTTCATCTCT 228 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || | | |||||||| |||| ||| ||||| || || ||||| || || || || ||| Sbjct 229 CATGTCCTCGCCTTCTTCGCCGCCTCAGATGGTATTGTGAACGAGAACCTCGTCGA-ACG 287 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 ||||| | ||| | ||| | | |||| ||||| ||||| ||||| |||||| Sbjct 288 TTTCTCCAACGAG--GTCCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 345 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314 || |||||| | ||||| |||| ||||| || || |||| ||||| || || Sbjct 346 ATGGAGAACATCCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCAAAGACCCC 405 Query 125315 --GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 ||| ||| | ||| ||||| | ||||| || || | || | || || ||| Sbjct 406 AAGCAGCGTGAGCAC---CTCTTCGATGCAATTGAAACCATCCCCTGCATCAAGAAGAAG 462 Query 125373 GCTCAATGGGTGATTCGGTGGATC---GATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 || | |||| | || |||||| ||| ||| ||||| | | ||| || | || Sbjct 463 GCCGACTGGGCACTCCGCTGGATCTCGGAT-ACG--GAGTCTACTTTCGCGGAGCGCCTT 519 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || |||||||| || ||||| |||||||| || || |||||| | ||||| ||| Sbjct 520 GTCGCCTTCGCCGCGGTCGAGGGTATCTTCTTCTCTGGGTCCTTTGCGTCAATCTTCTGG 579 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 |||||||||||||| | |||||||| || ||| | |||||| | || || || ||| Sbjct 580 CTCAAGAAGCGCGGCTTGATGCCCGGTCTCACGTTCTCGAACGAGCTCATCTCGCGTGAC 639 Query 125550 GAGGGCCTACACTGTGACTTTGC 125572 ||||| | ||| ||||| || Sbjct 640 GAGGGTATGCACACCGACTTCGC 662 Score = 89.7 bits (98), Expect = 8e-13 Identities = 116/159 (73%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 125700 ATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTG 125759 || |||||||||| |||||| |||||| | ||||| ||||| || || ||||||||||| Sbjct 836 ATCGGCATGAACTCCAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGATCGTCTACT- 894 Query 125760 TACGAGTTGATTGGC---CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACC 125816 || | ||||| |||| ||| || || || ||||| || |||||| | Sbjct 895 --CGTCGCGCTTGGCGATGACAAGCACTACGGCGTCACCAACCCCTTCGACTTCATGGAC 952 Query 125817 AGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 | || || || |||| ||||||||||| ||||||||| Sbjct 953 ATGATCTCGCTCCAGGGAAAGACCAACTTCTTCGAGAAG 991 >seq15036 Length=18609 Score = 127 bits (140), Expect = 3e-24 Identities = 252/368 (68%), Gaps = 4/368 (1%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| ||||| || || || | || ||||| | || || ||||| || ||| Sbjct 11744 CAGGGTGGCAACAAACGTCCTGGTGCCTTCGCTATCTACCTCGAGCCATGGCATGCCGAC 11685 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || ||||| | ||||| ||| ||| || |||| || ||| | ||| Sbjct 11684 GTGTTCGAGTTCATCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCCCGTGAC 11625 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || | ||| | || ||| ||||||||||||||||| | | |||||| | Sbjct 11624 CTCTTCTACGCCTTGTGGATCCCCGATCTGTTCATGAAGCGCGTCGAGGCGGGTGGCAAA 11565 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 ||| || | || ||| || | |||| || || ||| ||||| || ||||| Sbjct 11564 TGGTCACTGTTCTGTCCCAACGAGGCACCTGGCCTCCACGAGGTTTGGGGTGACGAGTTC 11505 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174 |||||| ||| | ||||||| ||||| || ||| |||| | |||| || | Sbjct 11504 GAGGCCCTTTACGAGCAGTACGAGCGTGAGGGTCGTGCACGGAAGACCA-TCGAGGCTC- 11447 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| || ||| | || ||| || | ||||| | ||||| || || | ||| |||| Sbjct 11446 AGAAGCTTTGGTACGCTATCCTGGAGTCTCAGATTGAGACCGGGGGCCCTTTCATGCTCT 11387 Query 97234 ACAAGGAT 97241 |||||||| Sbjct 11386 ACAAGGAT 11379 Score = 93.3 bits (102), Expect = 6e-14 Identities = 184/270 (68%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 97950 CTGTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATT 98009 || |||||||| |||||| | ||||||| |||||| ||||| | || ||||| Sbjct 10611 CTCTGGAACGACGACATGAAGAACATGATCATCGCCAACAACGGGTCTGTGCAGAACATC 10552 Query 98010 ACCATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCGACCAAG 98069 ||||||||| || || || || ||||||||||| |||||||| || ||| Sbjct 10551 GACATCATCCCCGAGGACGTGAAGGCGATTTACAAGACTGTATGGGAGATCTCGCAGAAG 10492 Query 98070 ACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAAT 98129 | | | |||| |||| || ||| | || | | ||| |||| || || |||| Sbjct 10491 AAGGTCCTCGACCTGGCCGCGGACCGCGGCGCATTCATCTGCCAGTCGCAGTCTCTCAAC 10432 Query 98130 CTGTACGTTGC-CGAGCCCACCTACAGTCGTATGACTTCGATACACTTTTACGCATGGAA 98188 || || |||| | ||| ||| || | | |||| || || || |||| ||||| Sbjct 10431 GTGCAC-TTGCAAGCGCCGACCAACGGACAGCTGACGAGCATGCATTTCTACGGCTGGAA 10373 Query 98189 CAAGGGCCTCAAGACGGGCATGTACTATCT 98218 ||||| || ||||||||||||||||| || Sbjct 10372 GAAGGGTCTGAAGACGGGCATGTACTACCT 10343 >seq13643 Length=1514 Score = 116 bits (128), Expect = 5e-21 Identities = 232/338 (69%), Gaps = 12/338 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| ||||||||||| || |||||||| || ||||| ||||||||| | ||||| Sbjct 355 ATATGGCAAATGTACAAACGAGCCCAGGCCTCATTCTGGACAGTCGAAGAGATTGATCTC 296 Query 125079 TCCAAGGACCTGTACGATTGGGA---GACTCGTTTGACTGAAACTGAGCGAGAGTTTATA 125135 || | ||||| | ||||||| | || | | || | | ||||| | || | Sbjct 295 TCGCATGACCTTTTCGATTGGAATGGGAAGC---TCACAAACAACGAGCGGCACTTCCTC 239 Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACA 125195 || | | | |||||||| |||| ||| || || || |||||||| |||||| | Sbjct 238 TCTTATGTGCTCGCCTTCTTCGCCGCCTCAGACGGCATTGTCAACGAGAATCTGGTCGAG 179 Query 125196 CGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 || || ||| | ||| | ||| || |||| ||||||||||| ||||| |||| Sbjct 178 CGGTTTTCTAACGAGGT--CCAGGCCGCTGAGGCACGATGCTTTTACGGCTTCCAGATCA 121 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC 125313 |||| || ||||| ||||| || | |||||| || || |||| ||||| | || | Sbjct 120 TGATCGAAAACGTCCACTCCGAGACATACTCTCTCCTCATCGACACTTACATCAGAGA-C 62 Query 125314 CGCAACGTAAACA-CATGCTCTTTAACGCAATCGACAC 125350 | | ||| | | | | |||||| |||| ||||| || Sbjct 61 CCCGACGAACGGACCTTCCTCTTTGACGCGATCGAAAC 24 >seq15381 Length=32578 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT--TTTGCGGCCATCT 125484 || || |||||||| || || |||||||| ||||| || | || ||||||||||||| Sbjct 22747 CTCGTCGCATTCGCAGCGGTGGAGGGCATATTCTTCTCT--TTGTCCTTTGCGGCCATCT 22690 Query 125485 TTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTC 125544 | |||||||||| || || | |||||||| || ||| ||||||||| || || | Sbjct 22689 TCTGGCTCAAGAGCCGGGGCTTGATGCCCGGCTTGTGCCACTCTAACGAGTTGATCTCGC 22630 Query 125545 GAGACGAGGGCCTACA 125560 | |||||||| || || Sbjct 22629 GGGACGAGGGGCTCCA 22614 >seq13655 Length=683 Score = 87.8 bits (96), Expect = 3e-12 Identities = 115/159 (72%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 125700 ATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTG 125759 || |||||||||| ||||| |||||| | ||||| ||||| || || ||||||||||| Sbjct 12 ATCGGCATGAACTCYAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGATCGTCTACT- 70 Query 125760 TACGAGTTGATTGGC---CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACC 125816 || | ||||| |||| ||| || || || ||||| || |||||| | Sbjct 71 --CGTCGCGCTTGGCGATGACAAGCACTACGGCGTCACCAACCCCTTCGACTTCATGGAC 128 Query 125817 AGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 | || || || |||| ||||||||||| ||||||||| Sbjct 129 ATGATCTCGCTCCAGGGAAAGACCAACTTCTTCGAGAAG 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740884096974280