Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq6477 114 3e-20 seq10137 96.9 8e-15 >seq6477 Length=89905 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || || || || || | ||| || || | || || ||| Sbjct 7409 GTCGACTCCTTCTGAATGTTGTAATCCGAAAGGGTACGACCATCCTCCAACTGCTTCCCA 7350 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| ||||| || || || || || ||||||||||| || || Sbjct 7349 GCAAAGATCAGGCGTTGTTGGTCAGGCGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTC 7290 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| || || ||||| | ||| || || || || ||||| || Sbjct 7289 ACATTGTCGATGGTATCCGAAGACTCCACCTCCAATGTGATCGTTTTGCCGGTAAGCGTC 7230 Query 104543 TTTACAAATATCTGCATT 104560 || || || ||||||||| Sbjct 7229 TTCACGAAAATCTGCATT 7212 Score = 105 bits (116), Expect = 2e-17 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || || || | ||||| || | || || ||||| || Sbjct 7631 TCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGCTTCCCAGCGAAG 7572 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| |||||||| || || || || || ||||||||||| || || ||||| Sbjct 7571 ATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATCTTGGCCTTCACATTG 7512 Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | || || | ||| || ||||| || || || |||||||| || || || || || Sbjct 7511 TCGATCGTGTC-CGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTCAC 7453 Query 104548 AAATATCTGCAT 104559 ||| || ||||| Sbjct 7452 AAAAATTTGCAT 7441 >seq10137 Length=11321 Score = 96.9 bits (106), Expect = 8e-15 Identities = 138/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || || || | ||| || || || || || ||||| || Sbjct 3025 TCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGCTGCTTACCAGCGAAG 3084 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | ||| || ||||| || || || || || ||||||||||| || || || || Sbjct 3085 ATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 3144 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG---TCTTACCAGTAAGTGTTTTT 104545 || | || || || || ||||| || || |||| ||||||| || | || || Sbjct 3145 TCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTTACCCGTCAACGTCTTG 3204 Query 104546 ACAAATATCTGCAT 104559 ||||| |||||||| Sbjct 3205 ACAAAGATCTGCAT 3218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151119537424324