Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq6477 98.7 8e-16 seq10137 95.1 1e-14 >seq6477 Length=89905 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 |||||||||| | || || | ||||| || |||||| |||||||||||||| | Sbjct 7439 CCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGA- 7381 Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || || | ||||||| |||||| || | | || | || || || || ||| Sbjct 7380 AAGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGG 7321 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||| ||| ||| | | | |||||||| | ||||||| Sbjct 7320 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCAC 7261 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | ||| || ||||| ||||| || || ||||| ||||||||||| Sbjct 7260 CTCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || |||||||||||||| || |||||||| || | | ||| ||||||||| |||| Sbjct 7643 TGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGC 7584 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || | ||||||||||| ||| | | ||||||||| ||| || Sbjct 7583 TTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATCTTG 7524 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||| | | | || || || | ||||| ||| | || || || ||||| ||| Sbjct 7523 GCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGTG 7464 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || ||||||||||| ||||| Sbjct 7463 AGGGTCTTCACAAAAATTTGCAT 7441 >seq10137 Length=11321 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 7/209 (3%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| ||||||||||| ||||||||||| || | || || | ||||| ||||| Sbjct 3012 ATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGCTG 3071 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || | || || |||||||| || || | || ||||||||| ||| || Sbjct 3072 CTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTT 3131 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGG---TTTTA 48697 | ||||| | | || || || || | ||||||| ||||| || || | | ||| Sbjct 3132 CGCCTTGACGTTGTCG--ATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTTA 3189 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || | || || ||||| |||||||| Sbjct 3190 CCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||||||||||| || ||||||||||||| | ||| | ||||| |||||| Sbjct 2726 TGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCAAGCTGC 2785 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || | ||||||||| || ||| | || ||||||||| || ||| Sbjct 2786 TTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTC 2845 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||| | | | ||||| || | ||||| ||| | || || || || || ||| Sbjct 2846 GCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTCCCCGTG 2905 Query 48704 AGAGTTTTCACAAAAATCTGCATC 48727 || || || || |||||||||||| Sbjct 2906 AGGGTCTTGACGAAAATCTGCATC 2929 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 48527 AGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTT 48585 || ||| |||||| || || ||||| || | || || || |||||||||||||||| Sbjct 3305 AGAGTGGACTCCTTCTGGATATTGTAGTCCGA-AAGAGTACGGCCGTCCTCCAGCTGCTT 3363 Query 48586 ACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTG 48645 |||| | | || | ||||||||| || || | | ||||||||| || ||| Sbjct 3364 ACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGC 3423 Query 48646 CTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | || ||||| |||| |||||| ||||| || ||||| || ||||| Sbjct 3424 CTTGACGTTGTCG--ATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTC 3481 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 | || ||||| || |||||||| Sbjct 3482 AAGGTCTTCACGAAGATCTGCAT 3504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421154152016903