Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq12501 89.7 3e-13 seq13938 87.8 9e-13 seq12472 86.0 3e-12 seq6077 84.2 1e-11 seq9627 82.4 4e-11 seq2316 82.4 4e-11 >seq12501 Length=1214 Score = 89.7 bits (98), Expect = 3e-13 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 11449 ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCT 11508 |||||| ||||| | | |||||||||| ||||||| ||||||||||||| ||||||| Sbjct 880 ATCAAACTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCT 939 Query 11509 RACCAACTGAGCTAATGGGCC 11529 ||||||||||||| | |||| Sbjct 940 AACCAACTGAGCTAGTCGGCC 960 >seq13938 Length=9251 Score = 87.8 bits (96), Expect = 9e-13 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| | | |||||||||| ||||||| ||||||||||||| ||||||| || Sbjct 1740 AAACTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAAC 1799 Query 11512 CAACTGAGCTAATGGGCCGT 11531 ||||||||||| | |||||| Sbjct 1800 CAACTGAGCTAGTCGGCCGT 1819 >seq12472 Length=8994 Score = 86.0 bits (94), Expect = 3e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11449 ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCT 11508 |||||| ||||| | | |||||||||| ||||||| ||||||||||||| ||||||| Sbjct 165 ATCAAACTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCT 224 Query 11509 RACCAACTGAGCTA 11522 ||||||||||||| Sbjct 225 AACCAACTGAGCTA 238 >seq6077 Length=9892 Score = 84.2 bits (92), Expect = 1e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| | | |||||||||| ||||||| ||||||||||||| ||||||| || Sbjct 6092 AAACTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAAC 6151 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||| | |||| Sbjct 6152 CAACTGAGCTAGTCGGCC 6169 >seq9627 Length=2982 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 2684 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 2743 Query 11528 CC 11529 || Sbjct 2744 CC 2745 >seq2316 Length=5644 Score = 82.4 bits (90), Expect = 4e-11 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| || Sbjct 3594 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGCCGG 3653 Query 11528 CCGT 11531 |||| Sbjct 3654 CCGT 3657 Lambda K H 0.639 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261430957575628