Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq13613 149 8e-31 >seq13613 Length=18521 Score = 149 bits (164), Expect = 8e-31 Identities = 295/436 (68%), Gaps = 3/436 (1%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||| |||| |||||||| | || || ||||| || ||||| || Sbjct 17224 CAAGCGAAGTCGGTATGCATGCCCTCGTCGCGCGATATGAGCTCGTTTGAGAACGTCAGG 17283 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || ||||| || ||||| || || | ||||| ||||| Sbjct 17284 CCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAACACCCAGAGAAGAAT 17343 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG---T 33480 || || || || || ||||| || | |||| ||| | | ||| ||| | | Sbjct 17344 ATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAACACGGACTGGTCGTCCGCT 17403 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| ||||| ||||||||||| || | ||| || || ||||| || || | Sbjct 17404 ATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGGGTATGGTTTCGATTGCGTCG 17463 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||| || | ||| | |||| | | |||||||||||| | ||| || | Sbjct 17464 AAGAGGAAGGTCCGTTCGTCGGGATCTCTGATATAAGTATCGATGAGGAGAGAGTAGGTC 17523 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 ||||| |||| |||||| || |||||||| ||||| || |||| ||||| | | Sbjct 17524 TCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAAAGCATCGTGCCTCAGCGGCC 17583 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || || || || |||| || || ||| ||| || || || || ||||| ||| || Sbjct 17584 TGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGACAATGCCGTCTGAGGCGGCG 17643 Query 33721 AAAAACGCCAATACAT 33736 || || || | |||| Sbjct 17644 AAGAAGGCGAGCACAT 17659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622800005363480