Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq13613 143 3e-29 seq10137 113 4e-20 seq6477 105 6e-18 >seq13613 Length=18521 Score = 143 bits (158), Expect = 3e-29 Identities = 133/166 (80%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 ||||| ||||| ||||||| |||||| ||||||||| | || || ||||| ||||| Sbjct 17384 TTCGCTGAGCGACTGGTGGCGTTTGCGGCCGTGGAGGGCATATTCTTCTCTGGGTGTTTT 17325 Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 ||| ||||||| | |||| || | |||| ||||||||||||||||||| ||||| Sbjct 17324 GCCTCCATCTTCTGGCTCAAGAAGCGTGGGC-TCATGCCCGGCCTGACGTTCTCAAACGA 17266 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC 46311 ||| |||||||||||||||||| ||||||| ||||| || || ||| Sbjct 17265 GCTCATATCGCGCGACGAGGGCATGCATACCGACTTCGCTTGCCTC 17220 >seq10137 Length=11321 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| |||||| || ||||||||||| Sbjct 2702 CCACCACGGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAG 2761 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | |||||||||||| || || Sbjct 2762 AGCGTGCGCCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGA 2821 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | ||||||| Sbjct 2822 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACC 2881 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || || || || |||||||||||||| Sbjct 2882 TCCAAGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || || ||||| || | || || |||||| |||||||| || Sbjct 3308 GTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTACCG 3367 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | |||||||||||| |||||||| || || ||||| ||| ||| |||| Sbjct 3368 GCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 3427 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| |||||| | |||| ||| | ||| || ||||| | || Sbjct 3428 ACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 3487 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 3488 TTCACGAAGATCTGCAT 3504 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| ||||||||||| ||| || |||||| ||||| |||||||| || ||| | Sbjct 3024 CTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGCTGCTTACCAGCGAA 3083 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| || ||||||||||| || ||||| || || ||||| || ||| ||||| | Sbjct 3084 GATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 3143 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGG---TTTTACCGGTTAGAGTTTT 131219 || | || || | ||||| | |||| ||| | | | ||||| || | || || Sbjct 3144 GTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTTACCCGTCAACGTCTT 3203 Query 131220 TACGAAAATCTGCAT 131234 || || |||||||| Sbjct 3204 GACAAAGATCTGCAT 3218 Score = 89.7 bits (98), Expect = 5e-13 Identities = 77/94 (82%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 |||||||||||| ||||||||||| || | ||||||| |||||| |||||||| || Sbjct 3588 GGTCGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGCCCGTCCTCGAGCTGCTTCCC 3647 Query 131097 TGCGTAGATTAAAC-GCTGCTGGTCCGGAGGGAT 131129 ||| |||| | || |||||||||| |||||||| Sbjct 3648 AGCGAAGATGAGACGGCTGCTGGTCGGGAGGGAT 3681 >seq6477 Length=89905 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || ||||| || ||| || |||||| ||||| |||||||| || Sbjct 7129 GGTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGCTGCTTCCC 7070 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | |||||||||||| |||||||| || || ||||| || ||| ||| Sbjct 7069 GGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATCTTCGCCTT 7010 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | ||| || | ||||||| |||| || | || || ||||| | || Sbjct 7009 AACGTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGTCAACGT 6950 Query 131217 TTTTACGAAAATCTGCAT 131234 || ||||| || ||||| Sbjct 6949 CTTCACGAAGATTTGCAT 6932 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| ||||| || | || | ||||||||||| |||||||||||||| Sbjct 7440 GCCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGA 7381 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||||| | |||||| || || |||| | || || ||||| || || Sbjct 7380 AAGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGG 7321 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || ||| ||| | | || | ||||| | ||||| | Sbjct 7320 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCAC 7261 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| ||||| || || || |||||||||||||| Sbjct 7260 CTCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | || |||||||| || || |||||||| Sbjct 6717 GCCTCCTCGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCGA 6658 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| ||||||||||||||| |||| || ||||||||||| ||||| Sbjct 6657 GAGTGTGCGTCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGAGG 6598 Query 131127 GAT 131129 ||| Sbjct 6597 GAT 6595 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| ||||||||||| ||| | ||||| |||||| ||| | || | Sbjct 6901 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCCG-------GCAAA 6849 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||||||||| || ||||| || || ||||| |||||| ||||| | Sbjct 6848 GATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTTTCGCCTTGACGTT 6789 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||| |||| ||||| | |||| ||| | || || || || || || || || Sbjct 6788 ATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTT-CCCGTGAGGGTCTTGAC 6730 Query 131223 GAAAATCTGCATGACT 131238 ||| ||||||||| || Sbjct 6729 GAAGATCTGCATGCCT 6714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471901269275520