Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6477 105 6e-18 >seq6477 Length=89905 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| | ||||| ||| | |||||| | || |||||||| || Sbjct 7212 AATGCAGATTTTCGTGAAGACGCTTACCGGCAAAACGATCACATTGGAGGTGGAGTCTTC 7271 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| ||||| | || | ||| ||||| || || ||||| ||||||| Sbjct 7272 GGATACCATCGACAATGTGAAGGCGAAGATTCAG-GACAAGGAGGGCATTCCGCCTGACC 7330 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | || ||||| || || || || || |||| ||| || | ||||||| Sbjct 7331 AACAACGCCTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTACA 7390 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | ||||| || || || ||||| || Sbjct 7391 ACATTCAGAAGGAGTCGACGCTTCA 7415 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||||||| || | ||||| |||| || ||||| || Sbjct 6932 ATGCAAATCTTCGTGAAGACGTTGACCGGAAAGACGATCACTCTCGAGGTCGAGTCTTCG 6991 Query 25059 GACACTATCGA-GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | | | || || | ||| ||||| || ||||| || || ||||| Sbjct 6992 GACACTATCGACAACGTTAAGGCGAAGATTCA-AGACAAGGAGGGGATCCCTCCCGACCA 7050 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || ||||| || || | || |||| |||||| || ||| || || Sbjct 7051 GCAGCGTCTCATCTTCGCCGGGAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTATAA 7110 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 7111 CATCCAGAAGGAGTCCACCCTTCA 7134 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/193 (73%), Gaps = 12/193 (6%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || | | | ||||| |||| ||||||||||| Sbjct 6718 ATGCAGATCTTCGTCAAGACCCTCACGGGAAGA-CTATCACCCTCGAGGTGGAGTCGTCC 6776 Query 25059 GACACTATCGAGTCAC-TGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| | || | || || |||| ||| ||||| || || || || ||||||| Sbjct 6777 GACACTATCGA-TAACGTCAAGGCGAAAATTCA-GGACAAGGAGGGCATCCCGCCTGACC 6834 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| |||| ||||||||| | || || | ||||||| | ||| |||| Sbjct 6835 AGCAGCGTCTTATCTTTGCCGGC-------TCGAGGACGGTCGCACTCTCTCCGACTACA 6887 Query 25177 ATATTCAAAAAGA 25189 | ||||| || || Sbjct 6888 ACATTCAGAAGGA 6900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433228169759945