Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq13613 194 2e-44 seq13619 176 5e-39 >seq13613 Length=18521 Score = 194 bits (214), Expect = 2e-44 Identities = 434/649 (67%), Gaps = 11/649 (2%) Strand=Plus/Plus Query 93004 GAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGG 93063 ||| |||||||| ||| |||| || || | | ||| | |||||||| |||| Sbjct 17136 GAACTCTTTCTCAATTTCAACTGCCTCAGTGATGATCTTGGCGACTCTACTCGGGTGTGG 17195 Query 93064 TTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCG 93123 | | | || || | | ||| | ||| || ||||||||||| | || ||||| || Sbjct 17196 TCGTCGACGGAGATGGTGGAACAGGAGGCAAGCGAAGTCGGTATGCATGCCCTCGTCGCG 17255 Query 93124 TGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAA 93183 ||||| | ||| || ||| || | || || | || || || ||||||||||| || Sbjct 17256 CGATATGAGCTCGTTTGAGAACGTCAGGCCGGGCATGAGCCCACGCTTCTTGAGCCAGAA 17315 Query 93184 TATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACG 93243 || || ||||||| ||||| || ||||| || |||||||| ||||| ||||| | || Sbjct 17316 GATGGAGGCAAAACACCCAGAGAAGAATATGCCCTCCACGGCCGCAAACGCCACCAGTCG 17375 Query 93244 TTCGGCAAAATTTGCGGAAT----TACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTT 93299 || || || |||| | | ||| ||||| || ||||| ||||| || | Sbjct 17376 CTCAGCGAA---CACGGACTGGTCGTCCGCT-ATCCAACGCAATGCCCAGTCGGCCTTCT 17431 Query 93300 TCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTC 93359 |||| ||||| |||| |||||||| |||| || ||| | || ||||| | ||||| Sbjct 17432 TCTTGATACAGGGTATGGTTTCGATTGCGTCGAAGAGGAAGGTCCGTTCGTCGGGATCTC 17491 Query 93360 GTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTT 93419 || || |||||||| | ||||| || | || || || || || || || || | Sbjct 17492 TGATATAAGTATCGATGAGGAGAGAGTAGGTCTCCGAGTGAACGTTTTCGATCATGATCT 17551 Query 93420 GGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGA 93479 | || ||||| || |||| || || | | ||| || || | |||||| | ||| || | Sbjct 17552 GAAAGCCGTAAAAGCATCGTGCCTCAGCGGCCTGGACCTCGTTAGAAAACCGCTCGACCA 17611 Query 93480 GATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAAT 93539 |||| || ||||| || || || || || || || || || | | || | || | Sbjct 17612 GATTCTCGTTGACAATGCCGTCTGAGGCGGCGAAGAAGGCGAGCACATAAGAGAGGAAGT 17671 Query 93540 GTTTCTCATCATCTTTAAGCTT---ATCCCAATCGGATAGATCTTTTGAAAGATCGACTT 93596 | ||| | | | | ||||| | ||| ||| | || || | |||||||| | | Sbjct 17672 GCCGCTCGTTGTTTGTGAGCTTCCCGTTCCAGTCGAAAAGGTCATGCGAAAGATCAATCT 17731 Query 93597 CTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||||||| ||||| || || || | || ||||||||| | |||||| Sbjct 17732 CTTCGACTGTCCAGAATGACGCCTGGGCCCGTTTGTACATTTGCCATAT 17780 >seq13619 Length=8937 Score = 176 bits (194), Expect = 5e-39 Identities = 379/563 (67%), Gaps = 9/563 (2%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| || |||||||| || | ||| ||||| || || || | ||| || ||| || Sbjct 668 AAGCATGCGAAGTCGGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGTG 609 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 | ||| || | || || || ||||||||||| || ||||| ||||| ||||| || Sbjct 608 AGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATTGACGCAAAGGACCCAGAGAAG 549 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG---CGGAATTA 93265 || ||||| || || || || || || |||| || || || ||| | | | | || Sbjct 548 AAGATACCCTCGACCGCGGCGAAGGCGACAAGGCGCTCCGCGAAAGTAGACTCCGTAT-- 491 Query 93266 CTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATA 93325 | | |||||| | ||||| ||||| || ||||| || || || | ||||| || Sbjct 490 CCG-AGATCCAGCGGAGTGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTTTCAATT 432 Query 93326 GCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAA 93385 || | || |||| || |||| | | ||| ||||| || ||||| | || || Sbjct 431 GCATCGAAGAGGTGCTCACGCTGCTTGGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAG 372 Query 93386 TACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCC 93445 || |||| || |||| |||||||| || ||||| |||||||| || | || || Sbjct 371 TAGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCA 312 Query 93446 GTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGAT 93505 | | ||| || || | || || | || ||||| || || || || |||||||| || Sbjct 311 GCGGCCTGGACCTCGTTGGAGAAACGTTCGACGAGGTTCTCGTTCACAATACCATCTGAG 252 Query 93506 GCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTA 93562 || || || || || | | ||| || || || |||||| || || | | || Sbjct 251 GCGGCGAAGAAGGCGAGGACATGAGAGATGAAGTGGCGCTCATCGTCGTTGAGACGGTTG 192 Query 93563 TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCT 93622 | ||||||| ||||| || |||||||| | || || | |||||||| || || || Sbjct 191 TGCCAATCGTGGAGATCCTTGGAAAGATCCATCTCCTCCGCGGTCCAAAAGGAAGCCTCG 132 Query 93623 GCTTTTTTGTACATATCCCATAT 93645 || || |||||||| | ||| || Sbjct 131 GCCTTCTTGTACATTTGCCAAAT 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556729220753720