Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6477 140 3e-28 seq10137 107 2e-18 >seq6477 Length=89905 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| |||||| |||| | || ||||| | | Sbjct 7213 ATGCAGATTTTCGTGAAGACGCTTACCGGCAAAACGATCACATTGGAGGTGGAGTCTTCG 7272 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || ||||| ||||||||||| ||||| || || ||| Sbjct 7273 GATACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCGCCTGACCAA 7332 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || ||||| || || ||||| |||||| || ||| | || ||||||||| Sbjct 7333 CAACGCCTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTACAAC 7392 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || | || | || ||||| |||||||||| Sbjct 7393 ATTCAGAAGGAGTCGACGCTTCACCTTGTCTTGCGTCTGCGCGGAGG 7439 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| ||||||| || || || | | Sbjct 6932 ATGCAAATCTTCGTGAAGACGTTGACCGGAAAGACGATCACTCTCGAGGTCGAGTCTTCG 6991 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||||||||||||||| || || ||||| || Sbjct 6992 GACACTATCGACAACGTTAAGGCGAAGATTCAAGACAAGGAGGGGATCCCTCCCGACCAG 7051 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | |||||| |||||| | ||||| || ||| Sbjct 7052 CAGCGTCTCATCTTCGCCGGGAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTATAAC 7111 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 7112 ATCCAGAAGGAGTCCACC 7129 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || ||||| ||| |||| || || || || || | Sbjct 7441 ATGCAAATTTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCCTCG 7500 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| || ||||| Sbjct 7501 GACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGGATTCCGCCTGATCAG 7560 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||||| ||||| || || ||||||| |||||| Sbjct 7561 CAGCGCCTGATCTTCGCTGGGAAGCAGTTGGAGGACGGGCGTACGCTCTCCGACTACAAC 7620 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 7621 ATCCAGAAGGA 7631 Score = 82.4 bits (90), Expect = 6e-11 Identities = 133/191 (70%), Gaps = 8/191 (4%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || ||||| | || Sbjct 6718 ATGCAGATCTTCGTCAAGACCCTCACGGG-AAGACTATCACCCTCGAGGTGGAGTCGTCC 6776 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| |||||||| ||||||||||| || || || || || Sbjct 6777 GACACTATCGATAACGTCAAGGCGAAAATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 6836 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||||||| | ||||| ||||| ||||||| |||||| Sbjct 6837 CAGCGTCTTATCTTTGCCGGC-------TCGAGGACGGTCGCACTCTCTCCGACTACAAC 6889 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 6890 ATTCAGAAGGA 6900 >seq10137 Length=11321 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || |||| || || ||||| || || Sbjct 3504 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTCC 3445 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || ||||| || Sbjct 3444 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 3385 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| |||||||| || ||| | ||||| ||| || | || || ||||| Sbjct 3384 CAGCGTCTTATCTTTGCCGGTAAGCAGCTGGAGGACGGCCGTACTCTTTCGGACTACAAT 3325 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 3324 ATCCAGAAGGAGTCCAC 3308 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| || || || | || || || ||| |||| | || || || | | Sbjct 2929 GATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCTTGGAGGTCGAGTCGTC 2870 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| || | || || || || ||||||||||||||||| ||||| || Sbjct 2869 GGACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATTCCGCCCGACCA 2810 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| || || || ||||| ||| | |||||| ||||| |||| |||||||| Sbjct 2809 GCAGCGTCTCATCTTCGCGGGCAAGCAGCTTGAGGATGGGCGCACGCTCTCTGATTACAA 2750 Query 22398 CATTCAAAAAGA 22409 ||| || || || Sbjct 2749 CATCCAGAAGGA 2738 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/194 (70%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGG---TCACTCTTGAAGTGGAAACC 22275 ||||| || ||||| || || || || ||||| | | |||| || || ||||| | Sbjct 3218 ATGCAGATCTTTGTCAAGACGTTGACGGGTAAGAAGACTATCACCCTCGAGGTGGAGTCT 3159 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| | |||| || ||||| |||||||||||||| || || || Sbjct 3158 TCGGACACGATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGAC 3099 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || | || || || || || ||| | |||||| |||||| | ||||| ||| Sbjct 3098 CAGCAGCGCTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGTCGCACCCTGTCCGACTAC 3039 Query 22396 AACATTCAAAAAGA 22409 |||||||| || || Sbjct 3038 AACATTCAGAAGGA 3025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419631302932195