Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq13619 125 9e-24 seq15036 116 4e-21 seq5406 87.8 2e-12 seq1054 82.4 9e-11 >seq13619 Length=8937 Score = 125 bits (138), Expect = 9e-24 Identities = 341/514 (66%), Gaps = 15/514 (3%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| | |||||||||||| |||||||| || |||||||| || || ||||| | || Sbjct 651 GTGCATACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGTGAGACCGGGCATCAAGCC 592 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | ||| || || ||||||||||| ||||| || Sbjct 591 GCGCTTCTTGAGCCAGAAGATTGACGCAAAGGACCCAGAGAAGAAGATACCCTCGACCGC 532 Query 126178 CGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTC---AAACCACTTCA 126233 ||||| || | || ||||| || |||| | |||| || || | ||| | Sbjct 531 GGCGAAGGCGACAAGGCGCTCCGCGAAAGTA----GACTCCGTATCCGAGATCCAGCGGA 476 Query 126234 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 126293 ||||| | ||||| |||| ||| || |||| ||| | || || || ||||| | || Sbjct 475 GTGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTTTCAATTGCATCGAAGAGGTGCT 416 Query 126294 -TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGG 126352 | | || || ||||||||||| | || ||||| || || |||||| |||| Sbjct 415 CACGCTGCT-TGGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTTTCGGAGTGG 357 Query 126353 ACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 126411 | | | ||| || | ||| | ||||||| |||| || || ||| ||||| Sbjct 356 ATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGGCCTGGACCTC 298 Query 126412 ATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 126471 | || ||| | || ||||| ||||| ||||| || | || || || || Sbjct 297 GTTGGAGAAACGTTCGACGAGGTTCTCGTTCACAATACCATCTGAGGCGGCGAAGAAGGC 238 Query 126472 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 126528 |||| || ||||| | | |||| ||||| | || | | ||| |||| || Sbjct 237 GAGGACATGAGAGATGAAGTGGCGCTCATCGTCGTTGAGACGGTTGTGCCAATCGTGGAG 178 Query 126529 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 126562 |||||| || ||||| | ||||||||| |||||| Sbjct 177 ATCCTTGGAAAGATCCATCTCCTCCGCGGTCCAA 144 >seq15036 Length=18609 Score = 116 bits (128), Expect = 4e-21 Identities = 297/447 (66%), Gaps = 15/447 (3%) Strand=Plus/Plus Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||||||||| |||||| | || ||| ||||| | || |||| || ||||| | | Sbjct 11377 GCATCCTTGTAGAGCATGAAAGGGCCCCCGGTCTCAATCTGAGACTCCAGGATAGCGTAC 11436 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGG--CGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 114706 || | | || | | || | | || ||| || || ||||| |||||||| | Sbjct 11437 CAAAGCTTCTGAGCCTCG-ATGGTCTTCCGT--GCACGACCCTCACGCTCGTACTGCTCG 11493 Query 114707 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 114766 || ||||| || ||||| |||||| |||| ||| || ||||||| | || ||| Sbjct 11494 TAAAGGGCCTCGAACTCGTCACCCCAAACCTCGTGGAGGCCAGGTGCCTCGTTGGGACAG 11553 Query 114767 AAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGA 114826 || || ||||||| |||||| |||| || ||||||||||| || || |||||||| | Sbjct 11554 AACAGTGACCATTTGCCACCCGCCTCGACGCGCTTCATGAACAGATCGGGGATCCACAAG 11613 Query 114827 GCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 114886 || ||||||| || || ||| | || || | || || || || | || | Sbjct 11614 GCGTAGAAGAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGATG 11673 Query 114887 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG- 114945 || || | | || || ||||| || || ||||| | |||| | || | |||| Sbjct 11674 AACTCGAACACGTCGGCATGCCATGGCTCGAGGTAGATAGCGAAGGCACC---AGGACGT 11730 Query 114946 -----ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 ||| |||||| ||||||| ||| |||| | |||| || ||||| |||| | Sbjct 11731 TTGTTGCCACCCTGGTCCACATACCGCGCGGTGGAGTCGTATACACGGAGCATAGGAACG 11790 Query 115001 ATACCATCAGATTGGCCATTTGTCCCC 115027 || || | || | ||||| || ||| Sbjct 11791 ATGCCGTTCGAGTAACCATTGGTTCCC 11817 >seq5406 Length=1760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 85/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 172799 TTCCCACGGAGAGGGAACACACCGTA-GTGATCACGACCAACCACAGAAAGACCAGCAAC 172857 || || || || |||||||| ||||| ||| |||||||| |||||| || ||||| | Sbjct 719 TTTCCGCGAAGCGGGAACACGCCGTACGTG-TCACGACCGACCACACCCAGCCCAGCGAT 661 Query 172858 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACT 172904 ||||| | ||| ||||| |||||||| || | |||||||||||||| Sbjct 660 CGCGAGCGCCTTGGCGGAGTCACCCTCAGTGAGGATGAGCGTACACT 614 >seq1054 Length=11289 Score = 82.4 bits (90), Expect = 9e-11 Identities = 268/410 (65%), Gaps = 15/410 (4%) Strand=Plus/Minus Query 10790 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 10849 || || ||||| || || | | ||| |||||||| || ||||| || | ||| Sbjct 1602 TCGAAACGACCGGGACGCATTAAGGCCGAGTCAAGGACGTCGGGCCGGTTGGTACCAGCG 1543 Query 10850 ATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAG-AGTTGATTGAT 10908 | ||| |||| | | || | | | ||||| |||||||| | |||| || || || | Sbjct 1542 AGGACGACGACGTGCTCCTGGGTGCCGAAGCCGTCCATCTC-GACAAGGAGCTGGTTCAG 1484 Query 10909 GGTTTGTTCGCGTTCATCATTCGCGGGCATACCA---CCCGCACTGCGTTGCTTACCGAC 10965 || || ||||| || || ||| || | || ||| | ||| ||| |||| Sbjct 1483 CGTCTGCTCGCGCTCGTCGTTCCCGCCGAAGCCCTTCCCCTTCCCGCGAGACTTGCCGAT 1424 Query 10966 GGCGTCAATTTCATCGATGAAAACGATACACG----GTTGATTTTCACGGGCAACTTCAA 11021 |||||| |||||||||||||| | ||| | | ||| | ||| || | ||| Sbjct 1423 GGCGTCGATTTCATCGATGAAGATGATCGAGGGAGCGTTCTTCTTC----GCTGTTGCAA 1368 Query 11022 AGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGG 11081 | | || ||||| | || ||| ||||| ||||||| || || || | || | | Sbjct 1367 ACAGGTCGCGGACACGGGAGGAACCCACACCGACAAACAGCTCGACGAACTCGGAACCAG 1308 Query 11082 AACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTC 11140 ||| | | |||||||||| || || ||||| | ||| ||||| |||||||| Sbjct 1307 -ACACGGAGTAGAAGGGGACGCCGGCCTCGCCCGCAGTCGCTTTTGCGAGCAGGGTCTTA 1249 Query 11141 CCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 || || ||||| || | ||| | |||||| || |||||| | ||||| Sbjct 1248 CCGGTACCAGGGGGACCAGAGAGGATGGCACCGCGAGGGATCTTTGCACC 1199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597212452811240