Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq10137 120 3e-22 seq6477 104 3e-17 >seq10137 Length=11321 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||| || | ||||| || |||| || ||||||||||| || || Sbjct 3313 CTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTACCGGCAAA 3372 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 3373 GATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 3431 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || ||||| |||| |||||||| ||||| || | ||||| | Sbjct 3432 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCA 3491 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 3492 CGAAGATCTGCAT 3504 Score = 116 bits (128), Expect = 4e-21 Identities = 159/215 (74%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 42000 ACCAA-ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| ||| | ||||||||||| ||||| ||||| || | ||| || || | || || Sbjct 3006 ACCAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTC 3065 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||||||||||||||||| || | ||||||||||| | || | | |||||||||| | Sbjct 3066 GAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-T 3124 Query 42119 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG-- 42174 || | || | |||| ||| | | | |||||| || ||||| |||| ||||| | Sbjct 3125 GAATCTTCGCCTTGA-CGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTC 3183 Query 42175 -TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || ||||| | |||||| |||||||| ||||| Sbjct 3184 TTCTTACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || |||||||||| || || ||| | || || |||||||| || Sbjct 2732 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCAAGCTGCTTGCCC 2791 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131 ||||| ||||| ||||||||||||| || | | |||||||||| ||| || || Sbjct 2792 GCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTC 2851 Query 42132 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 42191 | | | | ||||| ||| || || || | ||||| || || ||||| || ||| Sbjct 2852 ACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTCCCCGTGAGGGTC 2911 Query 42192 TTTACAAAGATTTGCAT 42208 || || || || ||||| Sbjct 2912 TTGACGAAAATCTGCAT 2928 >seq6477 Length=89905 Score = 104 bits (114), Expect = 3e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 42011 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 42070 |||||||||||| || || ||||| || | || || ||| |||| || | |||||| || Sbjct 7638 TGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGCTTCCC 7579 Query 42071 AGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TT 42129 |||||| || || |||||||| || | || | | |||||||||| ||| | || | | Sbjct 7578 AGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCC-TGAATCTTGGCCT 7520 Query 42130 TGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 42189 | | | | | |||||| || || || || | |||||| || || ||||| || | Sbjct 7519 TCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGTGAGGG 7460 Query 42190 TCTTTACAAAGATTTGCAT 42208 |||| ||||| |||||||| Sbjct 7459 TCTTCACAAAAATTTGCAT 7441 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || || || || | || || || | || || |||||||| || ||||| Sbjct 7123 CTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGCTGCTTCCCGGCGAA 7064 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | | |||||||| | ||| | || | | | ||| Sbjct 7063 GATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGT-CTTGAATCTTCGCCTTAACGT 7005 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || || || |||| ||||| || || || || | |||||| | Sbjct 7004 TGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGTCAACGTCTTCA 6945 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 6944 CGAAGATTTGCAT 6932 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/193 (71%), Gaps = 10/193 (5%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | ||||| || |||| || ||| | || || Sbjct 6901 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCCG-------GCAAA 6849 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||||||||| | || | || |||||||||| ||| |||| | |||| Sbjct 6848 GATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC-TGAATTTTCGCCTTGACGT 6790 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||| ||||| |||| ||||| || || ||||| || ||||| | Sbjct 6789 TATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTT-CCCGTGAGGGTCTTGA 6731 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 6730 CGAAGATCTGCAT 6718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543084445605520